HTqPCR: high-throughput analysis and visualization of quantitative real-time PCR data in R

por Dvinge, Heidi, Bertone, Paul
Publicado 2009

Identification of the missing pluripotency mediator downstream of leukaemia inhibitory factor

por Martello, Graziano, Bertone, Paul, Smith, Austin
Publicado 2013

PeakAnalyzer: Genome-wide annotation of chromatin binding and modification loci

por Salmon-Divon, Mali, Dvinge, Heidi, Tammoja, Kairi, Bertone, Paul
Publicado 2010

Integrated analysis of single-cell embryo data yields a unified transcriptome signature for the human pre-implantation epiblast

por Stirparo, Giuliano G., Boroviak, Thorsten, Guo, Ge, Nichols, Jennifer, Smith, Austin, Bertone, Paul
Publicado 2018

Structural genomics: a new era for pharmaceutical research

por Liu, Yang, Luscombe, Nicholas M, Alexandrov, Vadim, Bertone, Paul, Harrison, Paul, Zhang, Zhaolei, Gerstein, Mark
Publicado 2002

Digital transcriptome profiling of normal and glioblastoma-derived neural stem cells identifies genes associated with patient survival

por Engström, Pär G, Tommei, Diva, Stricker, Stefan H, Ender, Christine, Pollard, Steven M, Bertone, Paul
Publicado 2012

Naive Pluripotent Stem Cells Derived Directly from Isolated Cells of the Human Inner Cell Mass

por Guo, Ge, von Meyenn, Ferdinand, Santos, Fatima, Chen, Yaoyao, Reik, Wolf, Bertone, Paul, Smith, Austin, Nichols, Jennifer
Publicado 2016

Sall4 controls differentiation of pluripotent cells independently of the Nucleosome Remodelling and Deacetylation (NuRD) complex

por Miller, Anzy, Ralser, Meryem, Kloet, Susan L., Loos, Remco, Nishinakamura, Ryuichi, Bertone, Paul, Vermeulen, Michiel, Hendrich, Brian
Publicado 2016

Lineage-Specific Profiling Delineates the Emergence and Progression of Naive Pluripotency in Mammalian Embryogenesis

por Boroviak, Thorsten, Loos, Remco, Lombard, Patrick, Okahara, Junko, Behr, Rüdiger, Sasaki, Erika, Nichols, Jennifer, Smith, Austin, Bertone, Paul
Publicado 2015

Assessment of transcript reconstruction methods for RNA-seq

por Steijger, Tamara, Abril, Josep F, Engström, Pär G, Kokocinski, Felix, Hubbard, Tim J, Guigó, Roderic, Harrow, Jennifer, Bertone, Paul
Publicado 2013

The non-coding snRNA 7SK controls transcriptional termination, poising, and bidirectionality in embryonic stem cells

por Castelo-Branco, Gonçalo, Amaral, Paulo P, Engström, Pär G, Robson, Samuel C, Marques, Sueli C, Bertone, Paul, Kouzarides, Tony
Publicado 2013

NuRD-mediated deacetylation of H3K27 facilitates recruitment of Polycomb Repressive Complex 2 to direct gene repression

por Reynolds, Nicola, Salmon-Divon, Mali, Dvinge, Heidi, Hynes-Allen, Antony, Balasooriya, Gayan, Leaford, Donna, Behrens, Axel, Bertone, Paul, Hendrich, Brian
Publicado 2012

Single cell transcriptome analysis of human, marmoset and mouse embryos reveals common and divergent features of preimplantation development

por Boroviak, Thorsten, Stirparo, Giuliano G., Dietmann, Sabine, Hernando-Herraez, Irene, Mohammed, Hisham, Reik, Wolf, Smith, Austin, Sasaki, Erika, Nichols, Jennifer, Bertone, Paul
Publicado 2018

The Nucleosome Remodeling and Deacetylation Complex Modulates Chromatin Structure at Sites of Active Transcription to Fine-Tune Gene Expression

por Bornelöv, Susanne, Reynolds, Nicola, Xenophontos, Maria, Gharbi, Sarah, Johnstone, Ewan, Floyd, Robin, Ralser, Meryem, Signolet, Jason, Loos, Remco, Dietmann, Sabine, Bertone, Paul, Hendrich, Brian
Publicado 2018

Systematic evaluation of spliced alignment programs for RNA-seq data

por Engström, Pär G, Steijger, Tamara, Sipos, Botond, Grant, Gregory R, Kahles, André, Rätsch, Gunnar, Goldman, Nick, Hubbard, Tim J, Harrow, Jennifer, Guigó, Roderic, Bertone, Paul
Publicado 2013

Epigenetic resetting of human pluripotency

por Guo, Ge, von Meyenn, Ferdinand, Rostovskaya, Maria, Clarke, James, Dietmann, Sabine, Baker, Duncan, Sahakyan, Anna, Myers, Samuel, Bertone, Paul, Reik, Wolf, Plath, Kathrin, Smith, Austin
Publicado 2017

Correction: Epigenetic resetting of human pluripotency (doi:10.1242/dev.146811)

por Guo, Ge, von Meyenn, Ferdinand, Rostovskaya, Maria, Clarke, James, Dietmann, Sabine, Baker, Duncan, Sahakyan, Anna, Myers, Samuel, Bertone, Paul, Reik, Wolf, Plath, Kathrin, Smith, Austin
Publicado 2018

Resetting Transcription Factor Control Circuitry toward Ground-State Pluripotency in Human

por Takashima, Yasuhiro, Guo, Ge, Loos, Remco, Nichols, Jennifer, Ficz, Gabriella, Krueger, Felix, Oxley, David, Santos, Fatima, Clarke, James, Mansfield, William, Reik, Wolf, Bertone, Paul, Smith, Austin
Publicado 2014

Resetting Transcription Factor Control Circuitry toward Ground-State Pluripotency in Human

por Takashima, Yasuhiro, Guo, Ge, Loos, Remco, Nichols, Jennifer, Ficz, Gabriella, Krueger, Felix, Oxley, David, Santos, Fatima, Clarke, James, Mansfield, William, Reik, Wolf, Bertone, Paul, Smith, Austin
Publicado 2015

Gain of CTCF-Anchored Chromatin Loops Marks the Exit from Naive Pluripotency

por Pękowska, Aleksandra, Klaus, Bernd, Xiang, Wanqing, Severino, Jacqueline, Daigle, Nathalie, Klein, Felix A., Oleś, Małgorzata, Casellas, Rafael, Ellenberg, Jan, Steinmetz, Lars M., Bertone, Paul, Huber, Wolfgang
Publicado 2018