Synthetic Nucleotides as Probes of DNA Polymerase Specificity

por Walsh, Jason M., Beuning, Penny J.
Publicado 2012

The Roles of UmuD in Regulating Mutagenesis

por Ollivierre, Jaylene N., Fang, Jing, Beuning, Penny J.
Publicado 2010

Biochemical functional predictions for protein structures of unknown or uncertain function

por Mills, Caitlyn L., Beuning, Penny J., Ondrechen, Mary Jo
Publicado 2015

Selective disruption of the DNA polymerase III α–β complex by the umuD gene products

por Silva, Michelle C., Nevin, Philip, Ronayne, Erin A., Beuning, Penny J.
Publicado 2012

Mammalian DNA Polymerase Kappa Activity and Specificity

por Stern, Hannah R., Sefcikova, Jana, Chaparro, Victoria E., Beuning, Penny J.
Publicado 2019

Binding and compaction function of structural domains of SARS-CoV-2 nucleocapsid (N) protein on a single stranded nucleic acid substrate

por Morse, Michael, Sefcikova, Jana, Rouzina, Ioulia, Beuning, Penny J., Williams, Mark C.
Publicado 2022

Structural domains of SARS-CoV-2 nucleocapsid protein coordinate to compact long nucleic acid substrates

por Morse, Michael, Sefcikova, Jana, Rouzina, Ioulia, Beuning, Penny J, Williams, Mark C
Publicado 2022

Multiple Strategies for Translesion Synthesis in Bacteria

por Ippoliti, Paul J., DeLateur, Nicholas A., Jones, Kathryn M., Beuning, Penny J.
Publicado 2012

Altering the N-terminal arms of the polymerase manager protein UmuD modulates protein interactions

por Murison, David A., Ollivierre, Jaylene N., Huang, Qiuying, Budil, David E., Beuning, Penny J.
Publicado 2017

Single‐molecule mechanochemical characterization of E. coli pol III core catalytic activity

por Naufer, M. Nabuan, Murison, David A., Rouzina, Ioulia, Beuning, Penny J., Williams, Mark C.
Publicado 2017

Novel Mobile Phase to Control Charge States and Metal Adducts in the LC/MS for mRNA Characterization Assays

por Strezsak, Steven R., Pimentel, Alyssa Jean, Hill, Ian T., Beuning, Penny J., Skizim, Nicholas J.
Publicado 2022

Distinct Double- and Single-Stranded DNA Binding of E. coli Replicative DNA Polymerase III α Subunit

por McCauley, Micah J., Shokri, Leila, Sefcikova, Jana, Venclovas, Česlovas, Beuning, Penny J., Williams, Mark C.
Publicado 2008

Stereoselective Synthesis of β-Glycinamide Ribonucleotide

por Ngu, Lisa, Ray, Debarpita, Watson, Samantha S., Beuning, Penny J., Ondrechen, Mary Jo, O’Doherty, George A.
Publicado 2022

Prediction and Analysis of Multiple Sites and Inhibitors of SARS-CoV-2 Proteins

por Iyengar, Suhasini M., Barnsley, Kelton, Yen Vu, Hoang, Dilworth, Ryan, Sefcikova, Jana, Beuning, Penny, Jo Ondrechen, Mary
Publicado 2021

Structure and function of SARS-CoV-2 nucleocapsid protein measured using optical tweezers, confocal fluorescence, and AFM

por Morse, Michael, Sefcikova, Jana, McCauley, Micah J., Rouzina, Ioulia F., Beuning, Penny J., Williams, Mark C.
Publicado 2023

Multiprotein E. coli SSB–ssDNA complex shows both stable binding and rapid dissociation due to interprotein interactions

por Naufer, M Nabuan, Morse, Michael, Möller, Guðfríður Björg, McIsaac, James, Rouzina, Ioulia, Beuning, Penny J, Williams, Mark C
Publicado 2021

Polymerase manager protein UmuD directly regulates Escherichia coli DNA polymerase III α binding to ssDNA

por Chaurasiya, Kathy R., Ruslie, Clarissa, Silva, Michelle C., Voortman, Lukas, Nevin, Philip, Lone, Samer, Beuning, Penny J., Williams, Mark C.
Publicado 2013

Functional classification of protein structures by local structure matching in graph representation

por Mills, Caitlyn L., Garg, Rohan, Lee, Joslynn S., Tian, Liang, Suciu, Alexandru, Cooperman, Gene D., Beuning, Penny J., Ondrechen, Mary Jo
Publicado 2018

Prediction of distal residue participation in enzyme catalysis

por Brodkin, Heather R, DeLateur, Nicholas A, Somarowthu, Srinivas, Mills, Caitlyn L, Novak, Walter R, Beuning, Penny J, Ringe, Dagmar, Ondrechen, Mary Jo
Publicado 2015

Probing remote residues important for catalysis in Escherichia coli ornithine transcarbamoylase

por Ngu, Lisa, Winters, Jenifer N., Nguyen, Kien, Ramos, Kevin E., DeLateur, Nicholas A., Makowski, Lee, Whitford, Paul C., Ondrechen, Mary Jo, Beuning, Penny J.
Publicado 2020