Cortical Cartography: Mapping Arealization Using Single-Cell Omics Technology

por Nano, Patricia R., Nguyen, Claudia V., Mil, Jessenya, Bhaduri, Aparna
Publicado 2021

Identification of cell types in a mouse brain single-cell atlas using low sampling coverage

por Bhaduri, Aparna, Nowakowski, Tomasz J, Pollen, Alex A, Kriegstein, Arnold R
Publicado 2018

Identification of Lipid Heterogeneity and Diversity in the Developing Human Brain

por Bhaduri, Aparna, Neumann, Elizabeth K., Kriegstein, Arnold R., Sweedler, Jonathan V.
Publicado 2021

Single-cell atlas of early human brain development highlights heterogeneity of human neuroepithelial cells and early radial glia

por Eze, Ugomma C., Bhaduri, Aparna, Haeussler, Maximilian, Nowakowski, Tomasz J., Kriegstein, Arnold R.
Publicado 2021

Meningeal solitary fibrous tumor cell states phenocopy cerebral vascular development and homeostasis

por Raleigh, David, Mirchia, Kanish, Choudhury, Abrar, Joseph, Tara, Birrueta, Janeth, Phillips, Joanna, Bhaduri, Aparna, Crouch, Elizabeth, Perry, Arie
Publicado 2023

Quantitative analysis of mammalian translation initiation sites by FACS-seq

por Noderer, William L, Flockhart, Ross J, Bhaduri, Aparna, Diaz de Arce, Alexander J, Zhang, Jiajing, Khavari, Paul A, Wang, Clifford L
Publicado 2014

An atlas of cortical arealization identifies dynamic molecular signatures

por Bhaduri, Aparna, Sandoval-Espinosa, Carmen, Otero-Garcia, Marcos, Oh, Irene, Yin, Raymund, Eze, Ugomma C., Nowakowski, Tomasz J., Kriegstein, Arnold R.
Publicado 2021

UCSC Cell Browser: visualize your single-cell data

por Speir, Matthew L, Bhaduri, Aparna, Markov, Nikolay S, Moreno, Pablo, Nowakowski, Tomasz J, Papatheodorou, Irene, Pollen, Alex A, Raney, Brian J, Seninge, Lucas, Kent, W James, Haeussler, Maximilian
Publicado 2021

Single-cell genomics reveals region-specific developmental trajectories underlying neuronal diversity in the human hypothalamus

por Herb, Brian R., Glover, Hannah J., Bhaduri, Aparna, Colantuoni, Carlo, Bale, Tracy L., Siletti, Kimberly, Hodge, Rebecca, Lein, Ed, Kriegstein, Arnold R., Doege, Claudia A., Ament, Seth A.
Publicado 2023

A study of the mutational landscape of pediatric-type follicular lymphoma and pediatric nodal marginal zone lymphoma

por Ozawa, Michael G, Bhaduri, Aparna, Chisholm, Karen M, Baker, Steven A, Ma, Lisa, Zehnder, James L, Luna-Fineman, Sandra, Link, Michael P, Merker, Jason D, Arber, Daniel A, Ohgami, Robert S
Publicado 2016

Cell Stress in Cortical Organoids Impairs Molecular Subtype Specification

por Bhaduri, Aparna, Andrews, Madeline G., Mancia, Walter, Jung, Diane, Shin, David, Allen, Denise, Jung, Dana, Schmunk, Galina, Haeussler, Maximilian, Salma, Jahan, Pollen, Alex A., Nowakowski, Tomasz J., Kriegstein, Arnold R.
Publicado 2020

Pathway-based Approach Reveals Differential Sensitivity to E2F1 Inhibition in Glioblastoma

por Alvarado, Alvaro G., Tessema, Kaleab, Muthukrishnan, Sree Deepthi, Sober, Mackenzie, Kawaguchi, Riki, Laks, Dan R., Bhaduri, Aparna, Swarup, Vivek, Nathanson, David A., Geschwind, Daniel H., Goldman, Steven A., Kornblum, Harley I.
Publicado 2022

Common molecular features of H3K27M DMGs and PFA ependymomas map to hindbrain developmental pathways

por Pun, Matthew, Pratt, Drew, Nano, Patricia R., Joshi, Piyush K., Jiang, Li, Englinger, Bernhard, Rao, Arvind, Cieslik, Marcin, Chinnaiyan, Arul M., Aldape, Kenneth, Pfister, Stefan, Filbin, Mariella G., Bhaduri, Aparna, Venneti, Sriram
Publicado 2023

Neuroserpin expression during human brain development and in adult brain revealed by immunohistochemistry and single cell RNA sequencing

por Adorjan, Istvan, Tyler, Teadora, Bhaduri, Aparna, Demharter, Samuel, Finszter, Cintia Klaudia, Bako, Maria, Sebok, Oliver Marcell, Nowakowski, Tomasz J., Khodosevich, Konstantin, Møllgård, Kjeld, Kriegstein, Arnold R., Shi, Lei, Hoerder‐Suabedissen, Anna, Ansorge, Olaf, Molnár, Zoltán
Publicado 2019

Single-cell profiling of human gliomas reveals macrophage ontogeny as a basis for regional differences in macrophage activation in the tumor microenvironment

por Müller, Sören, Kohanbash, Gary, Liu, S. John, Alvarado, Beatriz, Carrera, Diego, Bhaduri, Aparna, Watchmaker, Payal B., Yagnik, Garima, Di Lullo, Elizabeth, Malatesta, Martina, Amankulor, Nduka M., Kriegstein, Arnold R., Lim, Daniel A., Aghi, Manish, Okada, Hideho, Diaz, Aaron
Publicado 2017

Cortical Neural Stem Cell Lineage Progression Is Regulated by Extrinsic Signaling Molecule Sonic Hedgehog

por Zhang, Yue, Liu, Guoping, Guo, Teng, Liang, Xiaoyi G., Du, Heng, Yang, Lin, Bhaduri, Aparna, Li, Xiaosu, Xu, Zhejun, Zhang, Zhuangzhi, Li, Zhenmeiyu, He, Miao, Tsyporin, Jeremiah, Kriegstein, Arnold R., Rubenstein, John L., Yang, Zhengang, Chen, Bin
Publicado 2020

LIF signaling regulates outer radial glial to interneuron fate during human cortical development

por Andrews, Madeline G., Siebert, Clara, Wang, Li, White, Matthew L., Ross, Jayden, Morales, Raul, Donnay, Megan, Bamfonga, Gradi, Mukhtar, Tanzila, McKinney, Arpana Arjun, Gemenes, Kaila, Wang, Shaohui, Bi, Qiuli, Crouch, Elizabeth E., Parikshak, Neelroop, Panagiotakos, Georgia, Huang, Eric, Bhaduri, Aparna, Kriegstein, Arnold R.
Publicado 2023

Molecular profiling of stem cell-derived retinal pigment epithelial cell differentiation established for clinical translation

por Petrus-Reurer, Sandra, Lederer, Alex R., Baqué-Vidal, Laura, Douagi, Iyadh, Pannagel, Belinda, Khven, Irina, Aronsson, Monica, Bartuma, Hammurabi, Wagner, Magdalena, Wrona, Andreas, Efstathopoulos, Paschalis, Jaberi, Elham, Willenbrock, Hanni, Shimizu, Yutaka, Villaescusa, J. Carlos, André, Helder, Sundstrӧm, Erik, Bhaduri, Aparna, Kriegstein, Arnold, Kvanta, Anders, La Manno, Gioele, Lanner, Fredrik
Publicado 2022

Multimodal Analysis of Composition and Spatial Architecture in Human Squamous Cell Carcinoma

por Ji, Andrew L., Rubin, Adam J., Thrane, Kim, Jiang, Sizun, Reynolds, David L., Meyers, Robin M., Guo, Margaret G., George, Benson M., Mollbrink, Annelie, Bergenstråhle, Joseph, Larsson, Ludvig, Bai, Yunhao, Zhu, Bokai, Bhaduri, Aparna, Meyers, Jordan M., Rovira-Clavé, Xavier, Hollmig, S. Tyler, Aasi, Sumaira Z., Nolan, Garry P., Lundeberg, Joakim, Khavari, Paul A.
Publicado 2020

Multimodal Analysis of Composition and Spatial Architecture in Human Squamous Cell Carcinoma

por Ji, Andrew L., Rubin, Adam J., Thrane, Kim, Jiang, Sizun, Reynolds, David L., Meyers, Robin M., Guo, Margaret G., George, Benson M., Mollbrink, Annelie, Bergenstråhle, Joseph, Larsson, Ludvig, Bai, Yunhao, Zhu, Bokai, Bhaduri, Aparna, Meyers, Jordan M., Rovira-Clavé, Xavier, Hollmig, S. Tyler, Aasi, Sumaira Z., Nolan, Garry P., Lundeberg, Joakim, Khavari, Paul A.
Publicado 2020