Disentangling bacterial invasiveness from lethality in an experimental host‐pathogen system

por Biancalani, Tommaso, Gore, Jeff
Publicado 2019

Resource Availability Modulates the Cooperative and Competitive Nature of a Microbial Cross-Feeding Mutualism

por Hoek, Tim A., Axelrod, Kevin, Biancalani, Tommaso, Yurtsev, Eugene A., Liu, Jinghui, Gore, Jeff
Publicado 2016

Correction: Resource Availability Modulates the Cooperative and Competitive Nature of a Microbial Cross-Feeding Mutualism

por Hoek, Tim A., Axelrod, Kevin, Biancalani, Tommaso, Yurtsev, Eugene A., Liu, Jinghui, Gore, Jeff
Publicado 2017

Reference-based cell type matching of in situ image-based spatial transcriptomics data on primary visual cortex of mouse brain

por Zhang, Yun, Miller, Jeremy A., Park, Jeongbin, Lelieveldt, Boudewijn P., Long, Brian, Abdelaal, Tamim, Aevermann, Brian D., Biancalani, Tommaso, Comiter, Charles, Dzyubachyk, Oleh, Eggermont, Jeroen, Langseth, Christoffer Mattsson, Petukhov, Viktor, Scalia, Gabriele, Vaishnav, Eeshit Dhaval, Zhao, Yilin, Lein, Ed S., Scheuermann, Richard H.
Publicado 2023

Deep learning and alignment of spatially resolved single-cell transcriptomes with Tangram

por Biancalani, Tommaso, Scalia, Gabriele, Buffoni, Lorenzo, Avasthi, Raghav, Lu, Ziqing, Sanger, Aman, Tokcan, Neriman, Vanderburg, Charles R., Segerstolpe, Åsa, Zhang, Meng, Avraham-Davidi, Inbal, Vickovic, Sanja, Nitzan, Mor, Ma, Sai, Subramanian, Ayshwarya, Lipinski, Michal, Buenrostro, Jason, Brown, Nik Bear, Fanelli, Duccio, Zhuang, Xiaowei, Macosko, Evan Z., Regev, Aviv
Publicado 2021

A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex

por Yao, Zizhen, Liu, Hanqing, Xie, Fangming, Fischer, Stephan, Adkins, Ricky S., Aldridge, Andrew I., Ament, Seth A., Bartlett, Anna, Behrens, M. Margarita, Van den Berge, Koen, Bertagnolli, Darren, de Bézieux, Hector Roux, Biancalani, Tommaso, Booeshaghi, A. Sina, Bravo, Héctor Corrada, Casper, Tamara, Colantuoni, Carlo, Crabtree, Jonathan, Creasy, Heather, Crichton, Kirsten, Crow, Megan, Dee, Nick, Dougherty, Elizabeth L., Doyle, Wayne I., Dudoit, Sandrine, Fang, Rongxin, Felix, Victor, Fong, Olivia, Giglio, Michelle, Goldy, Jeff, Hawrylycz, Mike, Herb, Brian R., Hertzano, Ronna, Hou, Xiaomeng, Hu, Qiwen, Kancherla, Jayaram, Kroll, Matthew, Lathia, Kanan, Li, Yang Eric, Lucero, Jacinta D., Luo, Chongyuan, Mahurkar, Anup, McMillen, Delissa, Nadaf, Naeem M., Nery, Joseph R., Nguyen, Thuc Nghi, Niu, Sheng-Yong, Ntranos, Vasilis, Orvis, Joshua, Osteen, Julia K., Pham, Thanh, Pinto-Duarte, Antonio, Poirion, Olivier, Preissl, Sebastian, Purdom, Elizabeth, Rimorin, Christine, Risso, Davide, Rivkin, Angeline C., Smith, Kimberly, Street, Kelly, Sulc, Josef, Svensson, Valentine, Tieu, Michael, Torkelson, Amy, Tung, Herman, Vaishnav, Eeshit Dhaval, Vanderburg, Charles R., van Velthoven, Cindy, Wang, Xinxin, White, Owen R., Huang, Z. Josh, Kharchenko, Peter V., Pachter, Lior, Ngai, John, Regev, Aviv, Tasic, Bosiljka, Welch, Joshua D., Gillis, Jesse, Macosko, Evan Z., Ren, Bing, Ecker, Joseph R., Zeng, Hongkui, Mukamel, Eran A.
Publicado 2021