Analysis of RNA sequences of 3636 SARS-CoV-2 collected from 55 countries reveals selective sweep of one virus type

por Biswas, Nidhan K., Majumder, Partha P.
Publicado 2020

Mapinsights: deep exploration of quality issues and error profiles in high-throughput sequence data

por Das, Subrata, Biswas, Nidhan K, Basu, Analabha
Publicado 2023

Integrative analysis of genomic and transcriptomic data of normal, tumour, and co‐occurring leukoplakia tissue triads drawn from patients with gingivobuccal oral cancer identifies...

por Ghosh, Arnab, Das, Chitrarpita, Ghose, Sandip, Maitra, Arindam, Roy, Bidyut, Majumder, Partha P., Biswas, Nidhan K.
Publicado 2022

dbGENVOC: database of GENomic Variants of Oral Cancer, with special reference to India

por Pradhan, Sanchari, Das, Subrata, Singh, Animesh K, Das, Chitrarpita, Basu, Analabha, Majumder, Partha P, Biswas, Nidhan K
Publicado 2021

Application of Random Forest and data integration identifies three dysregulated genes and enrichment of Central Carbon Metabolism pathway in Oral Cancer

por Mukhopadhyay, Srija, Ghosh, Sahana, Das, Debodipta, Arun, P., Roy, Bidyut, Biswas, Nidhan K., Maitra, Arindam, Majumder, Partha P.
Publicado 2020

Overexpression of CD73 is associated with recurrence and poor prognosis of gingivobuccal oral cancer as revealed by transcriptome and deep immune profiling of paired tumor and ma...

por Chatterjee, Ankita, Chaudhary, Amrita, Ghosh, Arnab, Arun, Pattatheyil, Mukherjee, Geetashree, Arun, Indu, Maitra, Arindam, Biswas, Nidhan, Majumder, Partha P.
Publicado 2023

Epigenomic dysregulation-mediated alterations of key biological pathways and tumor immune evasion are hallmarks of gingivo-buccal oral cancer

por Das, Debodipta, Ghosh, Sahana, Maitra, Arindam, Biswas, Nidhan K., Panda, Chinmay K., Roy, Bidyut, Sarin, Rajiv, Majumder, Partha P.
Publicado 2019

SARS-CoV-2 mutation 614G creates an elastase cleavage site enhancing its spread in high AAT-deficient regions

por Bhattacharyya, Chandrika, Das, Chitrarpita, Ghosh, Arnab, Singh, Animesh K., Mukherjee, Souvik, Majumder, Partha P., Basu, Analabha, Biswas, Nidhan K.
Publicado 2021

Analysis of the whole transcriptome from gingivo-buccal squamous cell carcinoma reveals deregulated immune landscape and suggests targets for immunotherapy

por Singh, Richa, De Sarkar, Navonil, Sarkar, Sumanta, Roy, Roshni, Chattopadhyay, Esita, Ray, Anindita, Biswas, Nidhan K., Maitra, Arindam, Roy, Bidyut
Publicado 2017

Study of Caspase 8 mutation in oral cancer and adjacent precancer tissues and implication in progression

por Singh, Richa, Das, Shreya, Datta, Sila, Mazumdar, Anjana, Biswas, Nidhan K., Maitra, Arindam, Majumder, Partha P., Ghose, Sandip, Roy, Bidyut
Publicado 2020

Computational prediction of the molecular mechanism of statin group of drugs against SARS-CoV-2 pathogenesis

por Ghosh, Dipanjan, Ghosh Dastidar, Debabrata, Roy, Kamalesh, Ghosh, Arnab, Mukhopadhyay, Debanjan, Sikdar, Nilabja, Biswas, Nidhan K., Chakrabarti, Gopal, Das, Amlan
Publicado 2022

Emergence of hybrid states of stem-like cancer cells correlates with poor prognosis in oral cancer

por Vipparthi, Kavya, Hari, Kishore, Chakraborty, Priyanka, Ghosh, Subhashis, Patel, Ankit Kumar, Ghosh, Arnab, Biswas, Nidhan Kumar, Sharan, Rajeev, Arun, Pattatheyil, Jolly, Mohit Kumar, Singh, Sandeep
Publicado 2022

Hedgehog Signaling Pathway Is Active in GBM with GLI1 mRNA Expression Showing a Single Continuous Distribution Rather than Discrete High/Low Clusters

por Chandra, Vikas, Das, Tapojyoti, Gulati, Puneet, Biswas, Nidhan K., Rote, Sarang, Chatterjee, Uttara, Ghosh, Samarendra N., Deb, Sumit, Saha, Suniti K., Chowdhury, Anup K., Ghosh, Subhashish, Rudin, Charles M., Mukherjee, Ankur, Basu, Analabha, Dhara, Surajit
Publicado 2015

Variant allele frequency enrichment analysis in vitro reveals sonic hedgehog pathway to impede sustained temozolomide response in GBM

por Biswas, Nidhan K., Chandra, Vikas, Sarkar-Roy, Neeta, Das, Tapojyoti, Bhattacharya, Rabindra N., Tripathy, Laxmi N., Basu, Sunandan K., Kumar, Shantanu, Das, Subrata, Chatterjee, Ankita, Mukherjee, Ankur, Basu, Pryiadarshi, Maitra, Arindam, Chattopadhyay, Ansuman, Basu, Analabha, Dhara, Surajit
Publicado 2015

A novel hotspot and rare somatic mutation p.A138V, at TP53 is associated with poor survival of pancreatic ductal and periampullary adenocarcinoma patients

por Saha, Gourab, Singh, Richa, Mandal, Argha, Das, Subrata, Chattopadhyay, Esita, Panja, Prasun, Roy, Paromita, DeSarkar, Navonil, Gulati, Sumit, Ghatak, Supriyo, Ghosh, Shibajyoti, Banerjee, Sudeep, Roy, Bidyut, Ghosh, Saurabh, Chaudhuri, Dipankar, Arora, Neeraj, Biswas, Nidhan K., Sikdar, Nilabja
Publicado 2020

Mutations in SARS-CoV-2 viral RNA identified in Eastern India: Possible implications for the ongoing outbreak in India and impact on viral structure and host susceptibility

por Maitra, Arindam, Sarkar, Mamta Chawla, Raheja, Harsha, Biswas, Nidhan K, Chakraborti, Sohini, Singh, Animesh Kumar, Ghosh, Shekhar, Sarkar, Sumanta, Patra, Subrata, Mondal, Rajiv Kumar, Ghosh, Trinath, Chatterjee, Ananya, Banu, Hasina, Majumdar, Agniva, Chinnaswamy, Sreedhar, Srinivasan, Narayanaswamy, Dutta, Shanta, Das, Saumitra
Publicado 2020

Reciprocal interplay between asporin and decorin: Implications in gastric cancer prognosis

por Basak, Dipjit, Jamal, Zarqua, Ghosh, Arnab, Mondal, Pronoy Kanti, Dey Talukdar, Priyanka, Ghosh, Semanti, Ghosh Roy, Biswadeep, Ghosh, Ranajoy, Halder, Aniket, Chowdhury, Abhijit, Dhali, Gopal Krishna, Chattopadhyay, Bitan Kumar, Saha, Makhan Lal, Basu, Abhimanyu, Roy, Sukanta, Mukherjee, Chitranjan, Biswas, Nidhan Kumar, Chatterji, Urmi, Datta, Shalini
Publicado 2021

Contrasting Distribution of SARS-CoV-2 Lineages across Multiple Rounds of Pandemic Waves in West Bengal, the Gateway of East and North-East States of India

por Singh, Animesh K., Laskar, Rezwanuzzaman, Banerjee, Anindita, Mondal, Rajiv Kumar, Gupta, Bishal, Deb, Sonia, Dutta, Shreelekha, Patra, Subrata, Ghosh, Trinath, Sarkar, Sumanta, Ghosh, Shekhar, Bhattacharya, Sabyasachi, Roy, Debojyoti, Chakraborty, Ankita, Chowdhury, Meghna, Mahaptra, Surajit, Paul, Antara, Mazumder, Anup, Chowdhury, Aparna, Chatterjee, Shiv Sekhar, Sarkar, Arunabha, Ray, Raja, Pal, Kuhu, Jana, Angshuman, Barik, Goutam, Ganguly, Swagata, Chatterjee, Mitali, Majhi, Dipankar, Bandopadhyay, Bhaswati, Das, Saumitra, Maitra, Arindam, Biswas, Nidhan K.
Publicado 2022

Genomic characterization and epidemiology of an emerging SARS-CoV-2 variant in Delhi, India

por Dhar, Mahesh S., Marwal, Robin, VS, Radhakrishnan, Ponnusamy, Kalaiarasan, Jolly, Bani, Bhoyar, Rahul C., Sardana, Viren, Naushin, Salwa, Rophina, Mercy, Mellan, Thomas A., Mishra, Swapnil, Whittaker, Charles, Fatihi, Saman, Datta, Meena, Singh, Priyanka, Sharma, Uma, Ujjainiya, Rajat, Bhatheja, Nitin, Divakar, Mohit Kumar, Singh, Manoj K., Imran, Mohamed, Senthivel, Vigneshwar, Maurya, Ranjeet, Jha, Neha, Mehta, Priyanka, A, Vivekanand, Sharma, Pooja, VR, Arvinden, Chaudhary, Urmila, Soni, Namita, Thukral, Lipi, Flaxman, Seth, Bhatt, Samir, Pandey, Rajesh, Dash, Debasis, Faruq, Mohammed, Lall, Hemlata, Gogia, Hema, Madan, Preeti, Kulkarni, Sanket, Chauhan, Himanshu, Sengupta, Shantanu, Kabra, Sandhya, Gupta, Ravindra K., Singh, Sujeet K., Agrawal, Anurag, Rakshit, Partha, Nandicoori, Vinay, Tallapaka, Karthik Bharadwaj, Sowpati, Divya Tej, Thangaraj, K., Bashyam, Murali Dharan, Dalal, Ashwin, Sivasubbu, Sridhar, Scaria, Vinod, Parida, Ajay, Raghav, Sunil K., Prasad, Punit, Sarin, Apurva, Mayor, Satyajit, Ramakrishnan, Uma, Palakodeti, Dasaradhi, Seshasayee, Aswin Sai Narain, Bhat, Manoj, Shouche, Yogesh, Pillai, Ajay, Dikid, Tanzin, Das, Saumitra, Maitra, Arindam, Chinnaswamy, Sreedhar, Biswas, Nidhan Kumar, Desai, Anita Sudhir, Pattabiraman, Chitra, Manjunatha, M. V., Mani, Reeta S., Arunachal Udupi, Gautam, Abraham, Priya, Atul, Potdar Varsha, Cherian, Sarah S.
Publicado 2021