SWATH2stats: An R/Bioconductor Package to Process and Convert Quantitative SWATH-MS Proteomics Data for Downstream Analysis Tools

por Blattmann, Peter, Heusel, Moritz, Aebersold, Ruedi
Publicado 2016

RNAi–Based Functional Profiling of Loci from Blood Lipid Genome-Wide Association Studies Identifies Genes with Cholesterol-Regulatory Function

por Blattmann, Peter, Schuberth, Christian, Pepperkok, Rainer, Runz, Heiko
Publicado 2013

Systematic characterization of pan‐cancer mutation clusters

por Buljan, Marija, Blattmann, Peter, Aebersold, Ruedi, Boutros, Michael
Publicado 2018

Generation of a zebrafish SWATH-MS spectral library to quantify 10,000 proteins

por Blattmann, Peter, Stutz, Vivienne, Lizzo, Giulia, Richard, Joy, Gut, Philipp, Aebersold, Ruedi
Publicado 2019

Vascular functioning and the water balance of ripening kiwifruit (Actinidia chinensis) berries

por Clearwater, Michael J., Luo, Zhiwei, Ong, Sam Eng Chye, Blattmann, Peter, Thorp, T. Grant
Publicado 2012

Systems Pharmacology Dissection of Cholesterol Regulation Reveals Determinants of Large Pharmacodynamic Variability between Cell Lines

por Blattmann, Peter, Henriques, David, Zimmermann, Michael, Frommelt, Fabian, Sauer, Uwe, Saez-Rodriguez, Julio, Aebersold, Ruedi
Publicado 2017

Influenza A Virus Infection of Human Primary Dendritic Cells Impairs Their Ability to Cross-Present Antigen to CD8 T Cells

por Smed-Sörensen, Anna, Chalouni, Cécile, Chatterjee, Bithi, Cohn, Lillian, Blattmann, Peter, Nakamura, Norihiro, Delamarre, Lélia, Mellman, Ira
Publicado 2012

Entry of Human Papillomavirus Type 16 by Actin-Dependent, Clathrin- and Lipid Raft-Independent Endocytosis

por Schelhaas, Mario, Shah, Bhavin, Holzer, Michael, Blattmann, Peter, Kühling, Lena, Day, Patricia M., Schiller, John T., Helenius, Ari
Publicado 2012

A computational framework for the inference of protein complex remodeling from whole-proteome measurements

por Buljan, Marija, Banaei-Esfahani, Amir, Blattmann, Peter, Meier-Abt, Fabienne, Shao, Wenguang, Vitek, Olga, Tang, Hua, Aebersold, Ruedi
Publicado 2023

Characterization of drug-induced transcriptional modules: towards drug repositioning and functional understanding

por Iskar, Murat, Zeller, Georg, Blattmann, Peter, Campillos, Monica, Kuhn, Michael, Kaminska, Katarzyna H, Runz, Heiko, Gavin, Anne-Claude, Pepperkok, Rainer, van Noort, Vera, Bork, Peer
Publicado 2013

Quantitative Interactomics in Primary T Cells Provides a Rationale for Concomitant PD-1 and BTLA Coinhibitor Blockade in Cancer Immunotherapy

por Celis-Gutierrez, Javier, Blattmann, Peter, Zhai, Yunhao, Jarmuzynski, Nicolas, Ruminski, Kilian, Grégoire, Claude, Ounoughene, Youcef, Fiore, Frédéric, Aebersold, Ruedi, Roncagalli, Romain, Gstaiger, Matthias, Malissen, Bernard
Publicado 2019

Pairwise effects between lipid GWAS genes modulate lipid plasma levels and cellular uptake

por Zimoń, Magdalena, Huang, Yunfeng, Trasta, Anthi, Halavatyi, Aliaksandr, Liu, Jimmy Z., Chen, Chia-Yen, Blattmann, Peter, Klaus, Bernd, Whelan, Christopher D., Sexton, David, John, Sally, Huber, Wolfgang, Tsai, Ellen A., Pepperkok, Rainer, Runz, Heiko
Publicado 2021

Systematic Cell-Based Phenotyping of Missense Alleles Empowers Rare Variant Association Studies: A Case for LDLR and Myocardial Infarction

por Thormaehlen, Aenne S., Schuberth, Christian, Won, Hong-Hee, Blattmann, Peter, Joggerst-Thomalla, Brigitte, Theiss, Susanne, Asselta, Rosanna, Duga, Stefano, Merlini, Pier Angelica, Ardissino, Diego, Lander, Eric S., Gabriel, Stacey, Rader, Daniel J., Peloso, Gina M., Pepperkok, Rainer, Kathiresan, Sekar, Runz, Heiko
Publicado 2015

NF-κB drives epithelial-mesenchymal mechanisms of lung fibrosis in a translational lung cell model

por Sieber, Patrick, Schäfer, Anny, Lieberherr, Raphael, Caimi, Silvia L., Lüthi, Urs, Ryge, Jesper, Bergmann, Jan H., Le Goff, François, Stritt, Manuel, Blattmann, Peter, Renault, Bérengère, Rammelt, Patrick, Sempere, Bruno, Freti, Diego, Studer, Rolf, White, Eric S., Birker-Robaczewska, Magdalena, Boucher, Maxime, Nayler, Oliver
Publicado 2023

Functional and spatial proteomics profiling reveals intra- and intercellular signaling crosstalk in colorectal cancer

por Plattner, Christina, Lamberti, Giorgia, Blattmann, Peter, Kirchmair, Alexander, Rieder, Dietmar, Loncova, Zuzana, Sturm, Gregor, Scheidl, Stefan, Ijsselsteijn, Marieke, Fotakis, Georgios, Noureen, Asma, Lisandrelli, Rebecca, Böck, Nina, Nemati, Niloofar, Krogsdam, Anne, Daum, Sophia, Finotello, Francesca, Somarakis, Antonios, Schäfer, Alexander, Wilflingseder, Doris, Gonzalez Acera, Miguel, Öfner, Dietmar, Huber, Lukas A., Clevers, Hans, Becker, Christoph, Farin, Henner F., Greten, Florian R., Aebersold, Ruedi, de Miranda, Noel F.C.C., Trajanoski, Zlatko
Publicado 2023

High‐throughput proteomic analysis of FFPE tissue samples facilitates tumor stratification

por Zhu, Yi, Weiss, Tobias, Zhang, Qiushi, Sun, Rui, Wang, Bo, Yi, Xiao, Wu, Zhicheng, Gao, Huanhuan, Cai, Xue, Ruan, Guan, Zhu, Tiansheng, Xu, Chao, Lou, Sai, Yu, Xiaoyan, Gillet, Ludovic, Blattmann, Peter, Saba, Karim, Fankhauser, Christian D., Schmid, Michael B., Rutishauser, Dorothea, Ljubicic, Jelena, Christiansen, Ailsa, Fritz, Christine, Rupp, Niels J., Poyet, Cedric, Rushing, Elisabeth, Weller, Michael, Roth, Patrick, Haralambieva, Eugenia, Hofer, Silvia, Chen, Chen, Jochum, Wolfram, Gao, Xiaofei, Teng, Xiaodong, Chen, Lirong, Zhong, Qing, Wild, Peter J., Aebersold, Ruedi, Guo, Tiannan
Publicado 2019