Circular Permutation in Proteins

por Bliven, Spencer, Prlić, Andreas
Publicado 2012

TRAL 2.0: Tandem Repeat Detection With Circular Profile Hidden Markov Models and Evolutionary Aligner

por Delucchi, Matteo, Näf, Paulina, Bliven, Spencer, Anisimova, Maria
Publicado 2021

A PDB-wide, evolution-based assessment of protein–protein interfaces

por Baskaran, Kumaran, Duarte, Jose M, Biyani, Nikhil, Bliven, Spencer, Capitani, Guido
Publicado 2014

Automated evaluation of quaternary structures from protein crystals

por Bliven, Spencer, Lafita, Aleix, Parker, Althea, Capitani, Guido, Duarte, Jose M.
Publicado 2018

Understanding the fabric of protein crystals: computational classification of biological interfaces and crystal contacts

por Capitani, Guido, Duarte, Jose M., Baskaran, Kumaran, Bliven, Spencer, Somody, Joseph C.
Publicado 2016

Analyzing the symmetrical arrangement of structural repeats in proteins with CE-Symm

por Bliven, Spencer E., Lafita, Aleix, Rose, Peter W., Capitani, Guido, Prlić, Andreas, Bourne, Philip E.
Publicado 2019

Pre-calculated protein structure alignments at the RCSB PDB website

por Prlić, Andreas, Bliven, Spencer, Rose, Peter W., Bluhm, Wolfgang F., Bizon, Chris, Godzik, Adam, Bourne, Philip E.
Publicado 2010

Low-pass spectral analysis of time-resolved serial femtosecond crystallography data

por Casadei, Cecilia M., Hosseinizadeh, Ahmad, Bliven, Spencer, Weinert, Tobias, Standfuss, Jörg, Fung, Russell, Schertler, Gebhard F. X., Santra, Robin
Publicado 2023

Systems biology of the structural proteome

por Brunk, Elizabeth, Mih, Nathan, Monk, Jonathan, Zhang, Zhen, O’Brien, Edward J., Bliven, Spencer E., Chen, Ke, Chang, Roger L., Bourne, Philip E., Palsson, Bernhard O.
Publicado 2016

Biological and functional relevance of CASP predictions

por Liu, Tianyun, Ish‐Shalom, Shirbi, Torng, Wen, Lafita, Aleix, Bock, Christian, Mort, Matthew, Cooper, David N, Bliven, Spencer, Capitani, Guido, Mooney, Sean D., Altman, Russ B.
Publicado 2017

BioJava 5: A community driven open-source bioinformatics library

por Lafita, Aleix, Bliven, Spencer, Prlić, Andreas, Guzenko, Dmytro, Rose, Peter W., Bradley, Anthony, Pavan, Paolo, Myers-Turnbull, Douglas, Valasatava, Yana, Heuer, Michael, Larson, Matt, Burley, Stephen K., Duarte, Jose M.
Publicado 2019

BioJava: an open-source framework for bioinformatics in 2012

por Prlić, Andreas, Yates, Andrew, Bliven, Spencer E., Rose, Peter W., Jacobsen, Julius, Troshin, Peter V., Chapman, Mark, Gao, Jianjiong, Koh, Chuan Hock, Foisy, Sylvain, Holland, Richard, Rimša, Gediminas, Heuer, Michael L., Brandstätter–Müller, H., Bourne, Philip E., Willis, Scooter
Publicado 2012