Engineered Root Bacteria Release Plant-Available Phosphate from Phytate

por Shulse, Christine N., Chovatia, Mansi, Agosto, Carolyn, Wang, Gaoyan, Hamilton, Matthew, Deutsch, Samuel, Yoshikuni, Yasuo, Blow, Matthew J.
Publicado 2019

Rnnotator: an automated de novo transcriptome assembly pipeline from stranded RNA-Seq reads

por Martin, Jeffrey, Bruno, Vincent M, Fang, Zhide, Meng, Xiandong, Blow, Matthew, Zhang, Tao, Sherlock, Gavin, Snyder, Michael, Wang, Zhong
Publicado 2010

RNA editing of human microRNAs

por Blow, Matthew J, Grocock, Russell J, van Dongen, Stijn, Enright, Anton J, Dicks, Ed, Futreal, P Andrew, Wooster, Richard, Stratton, Michael R
Publicado 2006

Targeted Deletion of the 9p21 Noncoding Coronary Artery Disease Risk Interval in Mice

por Visel, Axel, Zhu, Yiwen, May, Dalit, Afzal, Veena, Gong, Elaine, Attanasio, Catia, Blow, Matthew J., Cohen, Jonathan C., Rubin, Edward M., Pennacchio, Len A.
Publicado 2010

Resequencing and annotation of the Nostoc punctiforme ATTC 29133 genome: facilitating biofuel and high-value chemical production

por Moraes, Luis E., Blow, Matthew J., Hawley, Erik R., Piao, Hailan, Kuo, Rita, Chiniquy, Jennifer, Shapiro, Nicole, Woyke, Tanja, Fadel, James G., Hess, Matthias
Publicado 2017

DNA Methylation in Ensifer Species during Free-Living Growth and during Nitrogen-Fixing Symbiosis with Medicago spp.

por diCenzo, George C., Cangioli, Lisa, Nicoud, Quentin, Cheng, Janis H. T., Blow, Matthew J., Shapiro, Nicole, Woyke, Tanja, Biondi, Emanuele G., Alunni, Benoît, Mengoni, Alessio, Mergaert, Peter
Publicado 2022

Rapid Quantification of Mutant Fitness in Diverse Bacteria by Sequencing Randomly Bar-Coded Transposons

por Wetmore, Kelly M., Price, Morgan N., Waters, Robert J., Lamson, Jacob S., He, Jennifer, Hoover, Cindi A., Blow, Matthew J., Bristow, James, Butland, Gareth, Arkin, Adam P., Deutschbauer, Adam
Publicado 2015

Revealing the transcriptomic complexity of switchgrass by PacBio long-read sequencing

por Zuo, Chunman, Blow, Matthew, Sreedasyam, Avinash, Kuo, Rita C., Ramamoorthy, Govindarajan Kunde, Torres-Jerez, Ivone, Li, Guifen, Wang, Mei, Dilworth, David, Barry, Kerrie, Udvardi, Michael, Schmutz, Jeremy, Tang, Yuhong, Xu, Ying
Publicado 2018

Functional importance of cardiac enhancer-associated noncoding RNAs in heart development and disease

por Ounzain, Samir, Pezzuto, Iole, Micheletti, Rudi, Burdet, Frédéric, Sheta, Razan, Nemir, Mohamed, Gonzales, Christine, Sarre, Alexandre, Alexanian, Michael, Blow, Matthew J., May, Dalit, Johnson, Rory, Dauvillier, Jérôme, Pennacchio, Len A., Pedrazzini, Thierry
Publicado 2014

The regulatory and transcriptional landscape associated with carbon utilization in a filamentous fungus

por Wu, Vincent W., Thieme, Nils, Huberman, Lori B., Dietschmann, Axel, Kowbel, David J., Lee, Juna, Calhoun, Sara, Singan, Vasanth R., Lipzen, Anna, Xiong, Yi, Monti, Remo, Blow, Matthew J., O’Malley, Ronan C., Grigoriev, Igor V., Benz, J. Philipp, Glass, N. Louise
Publicado 2020

Large-Scale Discovery of Enhancers from Human Heart Tissue

por May, Dalit, Blow, Matthew J., Kaplan, Tommy, McCulley, David J., Jensen, Brian C., Akiyama, Jennifer A., Holt, Amy, Plajzer-Frick, Ingrid, Shoukry, Malak, Wright, Crystal, Afzal, Veena, Simpson, Paul C., Rubin, Edward M., Black, Brian L., Bristow, James, Pennacchio, Len A., Visel, Axel
Publicado 2011

Tissue-specific SMARCA4 binding at active and repressed regulatory elements during embryogenesis

por Attanasio, Catia, Nord, Alex S., Zhu, Yiwen, Blow, Matthew J., Biddie, Simon C., Mendenhall, Eric M., Dixon, Jesse, Wright, Crystal, Hosseini, Roya, Akiyama, Jennifer A., Holt, Amy, Plajzer-Frick, Ingrid, Shoukry, Malak, Afzal, Veena, Ren, Bing, Bernstein, Bradley E., Rubin, Edward M., Visel, Axel, Pennacchio, Len A.
Publicado 2014

The Epigenomic Landscape of Prokaryotes

por Blow, Matthew J., Clark, Tyson A., Daum, Chris G., Deutschbauer, Adam M., Fomenkov, Alexey, Fries, Roxanne, Froula, Jeff, Kang, Dongwan D., Malmstrom, Rex R., Morgan, Richard D., Posfai, Janos, Singh, Kanwar, Visel, Axel, Wetmore, Kelly, Zhao, Zhiying, Rubin, Edward M., Korlach, Jonas, Pennacchio, Len A., Roberts, Richard J.
Publicado 2016

Genome-wide fetalization of enhancer architecture in heart disease

por Spurrell, Cailyn H., Barozzi, Iros, Kosicki, Michael, Mannion, Brandon J., Blow, Matthew J., Fukuda-Yuzawa, Yoko, Slaven, Neil, Afzal, Sarah Y., Akiyama, Jennifer A., Afzal, Veena, Tran, Stella, Plajzer-Frick, Ingrid, Novak, Catherine S., Kato, Momoe, Lee, Elizabeth A., Garvin, Tyler H., Pham, Quan T., Kronshage, Anne N., Lisgo, Steven, Bristow, James, Cappola, Thomas P., Morley, Michael P., Margulies, Kenneth B., Pennacchio, Len A., Dickel, Diane E., Visel, Axel
Publicado 2022

Transcriptomic analysis of field-droughted sorghum from seedling to maturity reveals biotic and metabolic responses

por Varoquaux, Nelle, Cole, Benjamin, Gao, Cheng, Pierroz, Grady, Baker, Christopher R., Patel, Dhruv, Madera, Mary, Jeffers, Tim, Hollingsworth, Joy, Sievert, Julie, Yoshinaga, Yuko, Owiti, Judith A., Singan, Vasanth R., DeGraaf, Stephanie, Xu, Ling, Blow, Matthew J., Harrison, Maria J., Visel, Axel, Jansson, Christer, Niyogi, Krishna K., Hutmacher, Robert, Coleman-Derr, Devin, O’Malley, Ronan C., Taylor, John W., Dahlberg, Jeffery, Vogel, John P., Lemaux, Peggy G., Purdom, Elizabeth
Publicado 2019

Topologically associating domain boundaries are required for normal genome function

por Rajderkar, Sudha, Barozzi, Iros, Zhu, Yiwen, Hu, Rong, Zhang, Yanxiao, Li, Bin, Alcaina Caro, Ana, Fukuda-Yuzawa, Yoko, Kelman, Guy, Akeza, Adyam, Blow, Matthew J., Pham, Quan, Harrington, Anne N., Godoy, Janeth, Meky, Eman M., von Maydell, Kianna, Hunter, Riana D., Akiyama, Jennifer A., Novak, Catherine S., Plajzer-Frick, Ingrid, Afzal, Veena, Tran, Stella, Lopez-Rios, Javier, Talkowski, Michael E., Lloyd, K. C. Kent, Ren, Bing, Dickel, Diane E., Visel, Axel, Pennacchio, Len A.
Publicado 2023

Cell Type- and Tissue-specific Enhancers in Craniofacial Development

por Rajderkar, Sudha Sunil, Paraiso, Kitt, Amaral, Maria Luisa, Kosicki, Michael, Cook, Laura E., Darbellay, Fabrice, Spurrell, Cailyn H., Osterwalder, Marco, Zhu, Yiwen, Wu, Han, Afzal, Sarah Yasmeen, Blow, Matthew J., Kelman, Guy, Barozzi, Iros, Fukuda-Yuzawa, Yoko, Akiyama, Jennifer A., Afzal, Veena, Tran, Stella, Plajzer-Frick, Ingrid, Novak, Catherine S., Kato, Momoe, Hunter, Riana D., von Maydell, Kianna, Wang, Allen, Lin, Lin, Preissl, Sebastian, Lisgo, Steven, Ren, Bing, Dickel, Diane E., Pennacchio, Len A., Visel, Axel
Publicado 2023