Mito-nuclear co-evolution: the positive and negative sides of functional ancient mutations

por Levin, Liron, Blumberg, Amit, Barshad, Gilad, Mishmar, Dan
Publicado 2014

Human primitive brain displays negative mitochondrial-nuclear expression correlation of respiratory genes

por Barshad, Gilad, Blumberg, Amit, Cohen, Tal, Mishmar, Dan
Publicado 2018

mtDNA Chromatin-like Organization Is Gradually Established during Mammalian Embryogenesis

por Marom, Shani, Blumberg, Amit, Kundaje, Anshul, Mishmar, Dan
Publicado 2019

Corrigendum: Human primitive brain displays negative mitochondrial-nuclear expression correlation of respiratory genes

por Barshad, Gilad, Blumberg, Amit, Cohen, Tal, Mishmar, Dan
Publicado 2022

A common pattern of DNase I footprinting throughout the human mtDNA unveils clues for a chromatin-like organization

por Blumberg, Amit, Danko, Charles G., Kundaje, Anshul, Mishmar, Dan
Publicado 2018

Initiation of mtDNA transcription is followed by pausing, and diverges across human cell types and during evolution

por Blumberg, Amit, Rice, Edward J., Kundaje, Anshul, Danko, Charles G., Mishmar, Dan
Publicado 2017

Transcription Factors Bind Negatively Selected Sites within Human mtDNA Genes

por Blumberg, Amit, Sri Sailaja, Badi, Kundaje, Anshul, Levin, Liron, Dadon, Sara, Shmorak, Shimrit, Shaulian, Eitan, Meshorer, Eran, Mishmar, Dan
Publicado 2014

Characterizing RNA stability genome-wide through combined analysis of PRO-seq and RNA-seq data

por Blumberg, Amit, Zhao, Yixin, Huang, Yi-Fei, Dukler, Noah, Rice, Edward J., Chivu, Alexandra G., Krumholz, Katie, Danko, Charles G., Siepel, Adam
Publicado 2021

Mitochondrial 16S rRNA Is Methylated by tRNA Methyltransferase TRMT61B in All Vertebrates

por Bar-Yaacov, Dan, Frumkin, Idan, Yashiro, Yuka, Chujo, Takeshi, Ishigami, Yuma, Chemla, Yonatan, Blumberg, Amit, Schlesinger, Orr, Bieri, Philipp, Greber, Basil, Ban, Nenad, Zarivach, Raz, Alfonta, Lital, Pilpel, Yitzhak, Suzuki, Tsutomu, Mishmar, Dan
Publicado 2016

Correction: Mitochondrial 16S rRNA Is Methylated by tRNA Methyltransferase TRMT61B in All Vertebrates

por Bar-Yaacov, Dan, Frumkin, Idan, Yashiro, Yuka, Chujo, Takeshi, Ishigami, Yuma, Chemla, Yonatan, Blumberg, Amit, Schlesinger, Orr, Bieri, Philipp, Greber, Basil, Ban, Nenad, Zarivach, Raz, Alfonta, Lital, Pilpel, Yitzhak, Suzuki, Tsutomu, Mishmar, Dan
Publicado 2017

A single pseudouridine on rRNA regulates ribosome structure and function in the mammalian parasite Trypanosoma brucei

por Rajan, K. Shanmugha, Madmoni, Hava, Bashan, Anat, Taoka, Masato, Aryal, Saurav, Nobe, Yuko, Doniger, Tirza, Galili Kostin, Beathrice, Blumberg, Amit, Cohen-Chalamish, Smadar, Schwartz, Schraga, Rivalta, Andre, Zimmerman, Ella, Unger, Ron, Isobe, Toshiaki, Yonath, Ada, Michaeli, Shulamit
Publicado 2023