A direct approach to estimating false discovery rates conditional on covariates

por Boca, Simina M., Leek, Jeffrey T.
Publicado 2018

Understanding bias when estimating life expectancy from age at death: a simulation approach applied to Morquio syndrome A

por Yin, Xue, Ahn, Jaeil, Boca, Simina M.
Publicado 2022

Patient-oriented gene set analysis for cancer mutation data

por Boca, Simina M, Kinzler, Kenneth W, Velculescu, Victor E, Vogelstein, Bert, Parmigiani, Giovanni
Publicado 2010

Modulation of Radiation Response by the Tetrahydrobiopterin Pathway

por Pathak, Rupak, Cheema, Amrita K., Boca, Simina M., Krager, Kimberly J., Hauer-Jensen, Martin, Aykin-Burns, Nukhet
Publicado 2015

Evidence-Based Network Approach to Recommending Targeted Cancer Therapies

por Kancherla, Jayaram, Rao, Shruti, Bhuvaneshwar, Krithika, Riggins, Rebecca B., Beckman, Robert A., Madhavan, Subha, Corrada Bravo, Héctor, Boca, Simina M.
Publicado 2020

Quantification and expert evaluation of evidence for chemopredictive biomarkers to personalize cancer treatment

por Rao, Shruti, Beckman, Robert A., Riazi, Shahla, Yabar, Cinthya S., Boca, Simina M., Marshall, John L., Pishvaian, Michael J., Brody, Jonathan R., Madhavan, Subha
Publicado 2016

Discovery of potential urine-accessible metabolite biomarkers associated with muscle disease and corticosteroid response in the mdx mouse model for Duchenne

por Thangarajh, Mathula, Zhang, Aiping, Gill, Kirandeep, Ressom, Habtom W., Li, Zhenzhi, Varghese, Rency S., Hoffman, Eric P., Nagaraju, Kanneboyina, Hathout, Yetrib, Boca, Simina M.
Publicado 2019

An Open-Publishing Response to the COVID-19 Infodemic

por Rando, Halie M., Boca, Simina M., McGowan, Lucy D’Agostino, Himmelstein, Daniel S., Robson, Michael P., Rubinetti, Vincent, Velazquez, Ryan, Greene, Casey S., Gitter, Anthony
Publicado 2021

An Open-Publishing Response to the COVID-19 Infodemic

por Rando, Halie M., Boca, Simina M., McGowan, Lucy D’Agostino, Himmelstein, Daniel S., Robson, Michael P., Rubinetti, Vincent, Velazquez, Ryan, Greene, Casey S., Gitter, Anthony
Publicado 2021

Sources of Variability in Metabolite Measurements from Urinary Samples

por Xiao, Qian, Moore, Steven C., Boca, Simina M., Matthews, Charles E., Rothman, Nathaniel, Stolzenberg-Solomon, Rachael Z., Sinha, Rashmi, Cross, Amanda J., Sampson, Joshua N.
Publicado 2014

EGR1 regulates cellular metabolism and survival in endocrine resistant breast cancer

por Shajahan-Haq, Ayesha N., Boca, Simina M., Jin, Lu, Bhuvaneshwar, Krithika, Gusev, Yuriy, Cheema, Amrita K., Demas, Diane D., Raghavan, Kristopher S., Michalek, Ryan, Madhavan, Subha, Clarke, Robert
Publicado 2017

Real-world Studies Link NSAID Use to Improved Overall Lung Cancer Survival

por Roszik, Jason, Lee, J. Jack, Wu, Yi-Hung, Liu, Xi, Kawakami, Masanori, Kurie, Jonathan M., Belouali, Anas, Boca, Simina M., Gupta, Samir, Beckman, Robert A., Madhavan, Subha, Dmitrovsky, Ethan
Publicado 2022

Discovery of Metabolic Biomarkers for Duchenne Muscular Dystrophy within a Natural History Study

por Boca, Simina M., Nishida, Maki, Harris, Michael, Rao, Shruti, Cheema, Amrita K., Gill, Kirandeep, Seol, Haeri, Morgenroth, Lauren P., Henricson, Erik, McDonald, Craig, Mah, Jean K., Clemens, Paula R., Hoffman, Eric P., Hathout, Yetrib, Madhavan, Subha
Publicado 2016

Collaborative, Multidisciplinary Evaluation of Cancer Variants Through Virtual Molecular Tumor Boards Informs Local Clinical Practices

por Rao, Shruti, Pitel, Beth, Wagner, Alex H., Boca, Simina M., McCoy, Matthew, King, Ian, Gupta, Samir, Park, Ben Ho, Warner, Jeremy L., Chen, James, Rogan, Peter K., Chakravarty, Debyani, Griffith, Malachi, Griffith, Obi L., Madhavan, Subha
Publicado 2020

Correction: Discovery of Metabolic Biomarkers for Duchenne Muscular Dystrophy within a Natural History Study

por Boca, Simina M., Nishida, Maki, Harris, Michael, Rao, Shruti, Cheema, Amrita K., Gill, Kirandeep, Wang, Difei, An, Lin, Gauba, Robinder, Seol, Haeri, Morgenroth, Lauren P., Henricson, Erik, McDonald, Craig, Mah, Jean K., Clemens, Paula R., Hoffman, Eric P., Hathout, Yetrib, Madhavan, Subha
Publicado 2016

Integrated copy number and miRNA expression analysis in triple negative breast cancer of Latin American patients

por Sugita, Bruna M., Pereira, Silma R., de Almeida, Rodrigo C., Gill, Mandeep, Mahajan, Akanksha, Duttargi, Anju, Kirolikar, Saurabh, Fadda, Paolo, de Lima, Rubens S., Urban, Cicero A., Makambi, Kepher, Madhavan, Subha, Boca, Simina M., Gusev, Yuriy, Cavalli, Iglenir J., Ribeiro, Enilze M.S.F., Cavalli, Luciane R.
Publicado 2019

Adapting crowdsourced clinical cancer curation in CIViC to the ClinGen minimum variant level data community‐driven standards

por Danos, Arpad M., Ritter, Deborah I., Wagner, Alex H., Krysiak, Kilannin, Sonkin, Dmitriy, Micheel, Christine, McCoy, Matthew, Rao, Shruti, Raca, Gordana, Boca, Simina M., Roy, Angshumoy, Barnell, Erica K., McMichael, Joshua F., Kiwala, Susanna, Coffman, Adam C., Kujan, Lynzey, Kulkarni, Shashikant, Griffith, Malachi, Madhavan, Subha, Griffith, Obi L.
Publicado 2018

A virtual molecular tumor board to improve efficiency and scalability of delivering precision oncology to physicians and their patients

por Pishvaian, Michael J, Blais, Edik M, Bender, R Joseph, Rao, Shruti, Boca, Simina M, Chung, Vincent, Hendifar, Andrew E, Mikhail, Sam, Sohal, Davendra P S, Pohlmann, Paula R, Moore, Kathleen N, He, Kai, Monk, Bradley J, Coleman, Robert L, Herzog, Thomas J, Halverson, David D, DeArbeloa, Patricia, Petricoin, Emanuel F, Madhavan, Subha
Publicado 2019

Ten quick tips for deep learning in biology

por Lee, Benjamin D., Gitter, Anthony, Greene, Casey S., Raschka, Sebastian, Maguire, Finlay, Titus, Alexander J., Kessler, Michael D., Lee, Alexandra J., Chevrette, Marc G., Stewart, Paul Allen, Britto-Borges, Thiago, Cofer, Evan M., Yu, Kun-Hsing, Carmona, Juan Jose, Fertig, Elana J., Kalinin, Alexandr A., Signal, Brandon, Lengerich, Benjamin J., Triche, Timothy J., Boca, Simina M.
Publicado 2022

Identification and Development of Therapeutics for COVID-19

por Rando, Halie M., Wellhausen, Nils, Ghosh, Soumita, Lee, Alexandra J., Dattoli, Anna Ada, Hu, Fengling, Byrd, James Brian, Rafizadeh, Diane N., Lordan, Ronan, Qi, Yanjun, Sun, Yuchen, Brueffer, Christian, Field, Jeffrey M., Guebila, Marouen Ben, Jadavji, Nafisa M., Skelly, Ashwin N., Ramsundar, Bharath, Wang, Jinhui, Goel, Rishi Raj, Park, YoSon, Boca, Simina M., Gitter, Anthony, Greene, Casey S.
Publicado 2021