Tau-typing: a Nextflow pipeline for finding the best phylogenetic markers in the genome for molecular typing of microbial species

por Seabolt, Matthew H, Boddapati, Arun K, Forstedt, Joshua J, Konstantinidis, Konstantinos T
Publicado 2023

Human Plasma-like Medium Improves T Lymphocyte Activation

por Leney-Greene, Michael A., Boddapati, Arun K., Su, Helen C., Cantor, Jason R., Lenardo, Michael J.
Publicado 2019

Shared transcriptional profiles of atypical B cells suggest common drivers of expansion and function in malaria, HIV, and autoimmunity

por Holla, Prasida, Dizon, Brian, Ambegaonkar, Abhijit A., Rogel, Noga, Goldschmidt, Ella, Boddapati, Arun K., Sohn, Haewon, Sturdevant, Dan, Austin, James W., Kardava, Lela, Yuesheng, Li, Liu, Poching, Moir, Susan, Pierce, Susan K., Madi, Asaf
Publicado 2021

Early B cell factor 4 modulates FAS-mediated apoptosis and promotes cytotoxic function in human immune cells

por Kubo, Satoshi, Kataria, Rhea, Yao, Yikun, Gabrielski, Justin Q., Zheng, Lixin, Markowitz, Tovah E., Chan, Waipan, Song, Jian, Boddapati, Arun K., Saeki, Keita, Häupl, Björn, Park, Ann Y., Cheng, Yan H., Cui, Jing, Oellerich, Thomas, Lenardo, Michael J.
Publicado 2022

TREM2(+) and interstitial-like macrophages orchestrate airway inflammation in SARS-CoV-2 infection in rhesus macaques

por Upadhyay, Amit A., Viox, Elise G., Hoang, Timothy N., Boddapati, Arun K., Pino, Maria, Lee, Michelle Y.-H., Corry, Jacqueline, Strongin, Zachary, Cowan, David A., Beagle, Elizabeth N., Horton, Tristan R., Hamilton, Sydney, Aoued, Hadj, Harper, Justin L., Edwards, Christopher T., Nguyen, Kevin, Pellegrini, Kathryn L., Tharp, Gregory K., Piantadosi, Anne, Levit, Rebecca D., Amara, Rama R., Barratt-Boyes, Simon M., Ribeiro, Susan P., Sekaly, Rafick P., Vanderford, Thomas H., Schinazi, Raymond F., Paiardini, Mirko, Bosinger, Steven E.
Publicado 2023

A modified vaccinia Ankara vector-based vaccine protects macaques from SARS-CoV-2 infection, immune pathology, and dysfunction in the lungs

por Routhu, Nanda Kishore, Cheedarla, Narayanaiah, Gangadhara, Sailaja, Bollimpelli, Venkata Satish, Boddapati, Arun K., Shiferaw, Ayalnesh, Rahman, Sheikh Abdul, Sahoo, Anusmita, Edara, Venkata Viswanadh, Lai, Lilin, Floyd, Katharine, Wang, Shelly, Fischinger, Stephanie, Atyeo, Caroline, Shin, Sally A., Gumber, Sanjeev, Kirejczyk, Shannon, Cohen, Joyce, Jean, Sherrie M., Wood, Jennifer S., Connor-Stroud, Fawn, Stammen, Rachelle L., Upadhyay, Amit A., Pellegrini, Kathryn, Montefiori, David, Shi, Pei-Yong, Menachery, Vineet D., Alter, Galit, Vanderford, Thomas H., Bosinger, Steven E., Suthar, Mehul S., Amara, Rama Rao
Publicado 2021

Modulation of type I interferon responses potently inhibits SARS-CoV-2 replication and inflammation in rhesus macaques

por Hoang, Timothy N., Viox, Elise G., Upadhyay, Amit A., Strongin, Zachary, Tharp, Gregory K., Pino, Maria, Nchioua, Rayhane, Hirschenberger, Maximilian, Gagne, Matthew, Nguyen, Kevin, Harper, Justin L., Marciano, Shir, Boddapati, Arun K., Pellegrini, Kathryn L., Tisoncik-Go, Jennifer, Whitmore, Leanne S., Karunakaran, Kirti A., Roy, Melissa, Kirejczyk, Shannon, Curran, Elizabeth H., Wallace, Chelsea, Wood, Jennifer S., Connor-Stroud, Fawn, Kasturi, Sudhir P., Levit, Rebecca D., Gale, Michael, Vanderford, Thomas H., Silvestri, Guido, Busman-Sahay, Kathleen, Estes, Jacob D., Vaccari, Monica, Douek, Daniel C., Sparrer, Konstantin M.J., Kirchhoff, Frank, Johnson, R. Paul, Schreiber, Gideon, Bosinger, Steven E., Paiardini, Mirko
Publicado 2022

Baricitinib treatment resolves lower airway inflammation and neutrophil recruitment in SARS-CoV-2-infected rhesus macaques

por Hoang, Timothy N., Pino, Maria, Boddapati, Arun K., Viox, Elise G., Starke, Carly E., Upadhyay, Amit A., Gumber, Sanjeev, Busman-Sahay, Kathleen, Strongin, Zachary, Harper, Justin L., Tharp, Gregory K., Pellegrini, Kathryn L., Kirejczyk, Shannon, Zandi, Keivan, Tao, Sijia, Horton, Tristan R., Beagle, Elizabeth N., Mahar, Ernestine A., Lee, Michelle YH, Cohen, Joyce, Jean, Sherrie M., Wood, Jennifer S., Connor-Stroud, Fawn, Stammen, Rachelle L., Delmas, Olivia M., Wang, Shelly, Cooney, Kimberly A., Sayegh, Michael N., Wang, Lanfang, Weiskopf, Daniela, Filev, Peter D., Waggoner, Jesse, Piantadosi, Anne, Kasturi, Sudhir P., Al-Shakhshir, Hilmi, Ribeiro, Susan P., Sekaly, Rafick P., Levit, Rebecca D., Estes, Jacob D., Vanderford, Thomas H., Schinazi, Raymond F., Bosinger, Steven E., Paiardini, Mirko
Publicado 2020

Baricitinib treatment resolves lower-airway macrophage inflammation and neutrophil recruitment in SARS-CoV-2-infected rhesus macaques

por Hoang, Timothy N., Pino, Maria, Boddapati, Arun K., Viox, Elise G., Starke, Carly E., Upadhyay, Amit A., Gumber, Sanjeev, Nekorchuk, Michael, Busman-Sahay, Kathleen, Strongin, Zachary, Harper, Justin L., Tharp, Gregory K., Pellegrini, Kathryn L., Kirejczyk, Shannon, Zandi, Keivan, Tao, Sijia, Horton, Tristan R., Beagle, Elizabeth N., Mahar, Ernestine A., Lee, Michelle Y.H., Cohen, Joyce, Jean, Sherrie M., Wood, Jennifer S., Connor-Stroud, Fawn, Stammen, Rachelle L., Delmas, Olivia M., Wang, Shelly, Cooney, Kimberly A., Sayegh, Michael N., Wang, Lanfang, Filev, Peter D., Weiskopf, Daniela, Silvestri, Guido, Waggoner, Jesse, Piantadosi, Anne, Kasturi, Sudhir P., Al-Shakhshir, Hilmi, Ribeiro, Susan P., Sekaly, Rafick P., Levit, Rebecca D., Estes, Jacob D., Vanderford, Thomas H., Schinazi, Raymond F., Bosinger, Steven E., Paiardini, Mirko
Publicado 2021