Estimating the value of democracy relative to other institutional and economic outcomes among citizens in Brazil, France, and the United States

por Adserà, Alicia, Arenas, Andreu, Boix, Carles
Publicado 2023

Regulatory genomic circuitry of human disease loci by integrative epigenomics

por Boix, Carles A., James, Benjamin T., Park, Yongjin P., Meuleman, Wouter, Kellis, Manolis
Publicado 2021

Multitissue H3K27ac profiling of GTEx samples links epigenomic variation to disease

por Hou, Lei, Xiong, Xushen, Park, Yongjin, Boix, Carles, James, Benjamin, Sun, Na, He, Liang, Patel, Aman, Zhang, Zhizhuo, Molinie, Benoit, Van Wittenberghe, Nicholas, Steelman, Scott, Nusbaum, Chad, Aguet, François, Ardlie, Kristin G., Kellis, Manolis
Publicado 2023

Neurons burdened by DNA double-strand breaks incite microglia activation through antiviral-like signaling in neurodegeneration

por Welch, Gwyneth M., Boix, Carles A., Schmauch, Eloi, Davila-Velderrain, Jose, Victor, Matheus B., Dileep, Vishnu, Bozzelli, P. Lorenzo, Su, Qiao, Cheng, Jemmie D., Lee, Audrey, Leary, Noelle S., Pfenning, Andreas R., Kellis, Manolis, Tsai, Li-Huei
Publicado 2022

Conserved Epigenetic Regulatory Logic Infers Genes Governing Cell Identity

por Shim, Woo Jun, Sinniah, Enakshi, Xu, Jun, Vitrinel, Burcu, Alexanian, Michael, Andreoletti, Gaia, Shen, Sophie, Sun, Yuliangzi, Balderson, Brad, Boix, Carles, Peng, Guangdun, Jing, Naihe, Wang, Yuliang, Kellis, Manolis, Tam, Patrick P.L., Smith, Aaron, Piper, Michael, Christiaen, Lionel, Nguyen, Quan, Bodén, Mikael, Palpant, Nathan J.
Publicado 2020

The ENCODE Imputation Challenge: a critical assessment of methods for cross-cell type imputation of epigenomic profiles

por Schreiber, Jacob, Boix, Carles, wook Lee, Jin, Li, Hongyang, Guan, Yuanfang, Chang, Chun-Chieh, Chang, Jen-Chien, Hawkins-Hooker, Alex, Schölkopf, Bernhard, Schweikert, Gabriele, Carulla, Mateo Rojas, Canakoglu, Arif, Guzzo, Francesco, Nanni, Luca, Masseroli, Marco, Carman, Mark James, Pinoli, Pietro, Hong, Chenyang, Yip, Kevin Y., Spence, Jeffrey P., Batra, Sanjit Singh, Song, Yun S., Mahony, Shaun, Zhang, Zheng, Tan, Wuwei, Shen, Yang, Sun, Yuanfei, Shi, Minyi, Adrian, Jessika, Sandstrom, Richard, Farrell, Nina, Halow, Jessica, Lee, Kristen, Jiang, Lixia, Yang, Xinqiong, Epstein, Charles, Strattan, J. Seth, Bernstein, Bradley, Snyder, Michael, Kellis, Manolis, Stafford, William, Kundaje, Anshul
Publicado 2023

GENCODE 2021

por Frankish, Adam, Diekhans, Mark, Jungreis, Irwin, Lagarde, Julien, Loveland, Jane E, Mudge, Jonathan M, Sisu, Cristina, Wright, James C, Armstrong, Joel, Barnes, If, Berry, Andrew, Bignell, Alexandra, Boix, Carles, Carbonell Sala, Silvia, Cunningham, Fiona, Di Domenico, Tomás, Donaldson, Sarah, Fiddes, Ian T, García Girón, Carlos, Gonzalez, Jose Manuel, Grego, Tiago, Hardy, Matthew, Hourlier, Thibaut, Howe, Kevin L, Hunt, Toby, Izuogu, Osagie G, Johnson, Rory, Martin, Fergal J, Martínez, Laura, Mohanan, Shamika, Muir, Paul, Navarro, Fabio C P, Parker, Anne, Pei, Baikang, Pozo, Fernando, Riera, Ferriol Calvet, Ruffier, Magali, Schmitt, Bianca M, Stapleton, Eloise, Suner, Marie-Marthe, Sycheva, Irina, Uszczynska-Ratajczak, Barbara, Wolf, Maxim Y, Xu, Jinuri, Yang, Yucheng T, Yates, Andrew, Zerbino, Daniel, Zhang, Yan, Choudhary, Jyoti S, Gerstein, Mark, Guigó, Roderic, Hubbard, Tim J P, Kellis, Manolis, Paten, Benedict, Tress, Michael L, Flicek, Paul
Publicado 2020

GENCODE: reference annotation for the human and mouse genomes in 2023

por Frankish, Adam, Carbonell-Sala, Sílvia, Diekhans, Mark, Jungreis, Irwin, Loveland, Jane E, Mudge, Jonathan M, Sisu, Cristina, Wright, James C, Arnan, Carme, Barnes, If, Banerjee, Abhimanyu, Bennett, Ruth, Berry, Andrew, Bignell, Alexandra, Boix, Carles, Calvet, Ferriol, Cerdán-Vélez, Daniel, Cunningham, Fiona, Davidson, Claire, Donaldson, Sarah, Dursun, Cagatay, Fatima, Reham, Giorgetti, Stefano, Giron, Carlos Garcıa, Gonzalez, Jose Manuel, Hardy, Matthew, Harrison, Peter W, Hourlier, Thibaut, Hollis, Zoe, Hunt, Toby, James, Benjamin, Jiang, Yunzhe, Johnson, Rory, Kay, Mike, Lagarde, Julien, Martin, Fergal J, Gómez, Laura Martínez, Nair, Surag, Ni, Pengyu, Pozo, Fernando, Ramalingam, Vivek, Ruffier, Magali, Schmitt, Bianca M, Schreiber, Jacob M, Steed, Emily, Suner, Marie-Marthe, Sumathipala, Dulika, Sycheva, Irina, Uszczynska-Ratajczak, Barbara, Wass, Elizabeth, Yang, Yucheng T, Yates, Andrew, Zafrulla, Zahoor, Choudhary, Jyoti S, Gerstein, Mark, Guigo, Roderic, Hubbard, Tim J P, Kellis, Manolis, Kundaje, Anshul, Paten, Benedict, Tress, Michael L, Flicek, Paul
Publicado 2022