Rational engineering of sequence specificity in R.MwoI restriction endonuclease

por Skowronek, Krzysztof, Boniecki, Michal J., Kluge, Boguslaw, Bujnicki, Janusz M.
Publicado 2012

SimRNAweb: a web server for RNA 3D structure modeling with optional restraints

por Magnus, Marcin, Boniecki, Michał J., Dawson, Wayne, Bujnicki, Janusz M.
Publicado 2016

RNA and protein 3D structure modeling: similarities and differences

por Rother, Kristian, Rother, Magdalena, Boniecki, Michał, Puton, Tomasz, Bujnicki, Janusz M.
Publicado 2011

Structure and functional dynamics of the mitochondrial Fe/S cluster synthesis complex

por Boniecki, Michal T., Freibert, Sven A., Mühlenhoff, Ulrich, Lill, Roland, Cygler, Miroslaw
Publicado 2017

Type II restriction endonuclease R.Hpy188I belongs to the GIY-YIG nuclease superfamily, but exhibits an unusual active site

por Kaminska, Katarzyna H, Kawai, Mikihiko, Boniecki, Michal, Kobayashi, Ichizo, Bujnicki, Janusz M
Publicado 2008

MetalionRNA: computational predictor of metal-binding sites in RNA structures

por Philips, Anna, Milanowska, Kaja, Lach, Grzegorz, Boniecki, Michal, Rother, Kristian, Bujnicki, Janusz M.
Publicado 2012

S6:S18 ribosomal protein complex interacts with a structural motif present in its own mRNA

por Matelska, Dorota, Purta, Elzbieta, Panek, Sylwia, Boniecki, Michal J., Bujnicki, Janusz M., Dunin-Horkawicz, Stanislaw
Publicado 2013

RNAProbe: a web server for normalization and analysis of RNA structure probing data

por Wirecki, Tomasz K, Merdas, Katarzyna, Bernat, Agata, Boniecki, Michał J, Bujnicki, Janusz M, Stefaniak, Filip
Publicado 2020

SimRNA: a coarse-grained method for RNA folding simulations and 3D structure prediction

por Boniecki, Michal J., Lach, Grzegorz, Dawson, Wayne K., Tomala, Konrad, Lukasz, Pawel, Soltysinski, Tomasz, Rother, Kristian M., Bujnicki, Janusz M.
Publicado 2016

Computational modeling of RNA 3D structures, with the aid of experimental restraints

por Magnus, Marcin, Matelska, Dorota, Łach, Grzegorz, Chojnowski, Grzegorz, Boniecki, Michal J, Purta, Elzbieta, Dawson, Wayne, Dunin-Horkawicz, Stanislaw, Bujnicki, Janusz M
Publicado 2014

N-terminal tyrosine of ISCU2 triggers [2Fe-2S] cluster synthesis by ISCU2 dimerization

por Freibert, Sven-A., Boniecki, Michal T., Stümpfig, Claudia, Schulz, Vinzent, Krapoth, Nils, Winge, Dennis R., Mühlenhoff, Ulrich, Stehling, Oliver, Cygler, Miroslaw, Lill, Roland
Publicado 2021

Molecular basis for the binding and modulation of V-ATPase by a bacterial effector protein

por Zhao, Jianhua, Beyrakhova, Ksenia, Liu, Yao, Alvarez, Claudia P., Bueler, Stephanie A., Xu, Li, Xu, Caishuang, Boniecki, Michal T., Kanelis, Voula, Luo, Zhao-Qing, Cygler, Miroslaw, Rubinstein, John L.
Publicado 2017

RNArchitecture: a database and a classification system of RNA families, with a focus on structural information

por Boccaletto, Pietro, Magnus, Marcin, Almeida, Catarina, Żyła, Adriana, Astha, Astha, Pluta, Radosław, Bagiński, Błażej, Jankowska, Elżbieta, Dunin-Horkawicz, Stanisław, Wirecki, Tomasz K, Boniecki, Michał J, Stefaniak, Filip, Bujnicki, Janusz M
Publicado 2018

RNA-Puzzles Round II: assessment of RNA structure prediction programs applied to three large RNA structures

por Miao, Zhichao, Adamiak, Ryszard W., Blanchet, Marc-Frédérick, Boniecki, Michal, Bujnicki, Janusz M., Chen, Shi-Jie, Cheng, Clarence, Chojnowski, Grzegorz, Chou, Fang-Chieh, Cordero, Pablo, Cruz, José Almeida, Ferré-D'Amaré, Adrian R., Das, Rhiju, Ding, Feng, Dokholyan, Nikolay V., Dunin-Horkawicz, Stanislaw, Kladwang, Wipapat, Krokhotin, Andrey, Lach, Grzegorz, Magnus, Marcin, Major, François, Mann, Thomas H., Masquida, Benoît, Matelska, Dorota, Meyer, Mélanie, Peselis, Alla, Popenda, Mariusz, Purzycka, Katarzyna J., Serganov, Alexander, Stasiewicz, Juliusz, Szachniuk, Marta, Tandon, Arpit, Tian, Siqi, Wang, Jian, Xiao, Yi, Xu, Xiaojun, Zhang, Jinwei, Zhao, Peinan, Zok, Tomasz, Westhof, Eric
Publicado 2015

RNA-Puzzles Round III: 3D RNA structure prediction of five riboswitches and one ribozyme

por Miao, Zhichao, Adamiak, Ryszard W., Antczak, Maciej, Batey, Robert T., Becka, Alexander J., Biesiada, Marcin, Boniecki, Michał J., Bujnicki, Janusz M., Chen, Shi-Jie, Cheng, Clarence Yu, Chou, Fang-Chieh, Ferré-D'Amaré, Adrian R., Das, Rhiju, Dawson, Wayne K., Ding, Feng, Dokholyan, Nikolay V., Dunin-Horkawicz, Stanisław, Geniesse, Caleb, Kappel, Kalli, Kladwang, Wipapat, Krokhotin, Andrey, Łach, Grzegorz E., Major, François, Mann, Thomas H., Magnus, Marcin, Pachulska-Wieczorek, Katarzyna, Patel, Dinshaw J., Piccirilli, Joseph A., Popenda, Mariusz, Purzycka, Katarzyna J., Ren, Aiming, Rice, Greggory M., Santalucia, John, Sarzynska, Joanna, Szachniuk, Marta, Tandon, Arpit, Trausch, Jeremiah J., Tian, Siqi, Wang, Jian, Weeks, Kevin M., Williams, Benfeard, Xiao, Yi, Xu, Xiaojun, Zhang, Dong, Zok, Tomasz, Westhof, Eric
Publicado 2017

RNA-Puzzles Round IV: 3D structure predictions of four ribozymes and two aptamers

por Miao, Zhichao, Adamiak, Ryszard W., Antczak, Maciej, Boniecki, Michał J., Bujnicki, Janusz, Chen, Shi-Jie, Cheng, Clarence Yu, Cheng, Yi, Chou, Fang-Chieh, Das, Rhiju, Dokholyan, Nikolay V., Ding, Feng, Geniesse, Caleb, Jiang, Yangwei, Joshi, Astha, Krokhotin, Andrey, Magnus, Marcin, Mailhot, Olivier, Major, Francois, Mann, Thomas H., Piątkowski, Paweł, Pluta, Radoslaw, Popenda, Mariusz, Sarzynska, Joanna, Sun, Lizhen, Szachniuk, Marta, Tian, Siqi, Wang, Jian, Wang, Jun, Watkins, Andrew M., Wiedemann, Jakub, Xiao, Yi, Xu, Xiaojun, Yesselman, Joseph D., Zhang, Dong, Zhang, Yi, Zhang, Zhenzhen, Zhao, Chenhan, Zhao, Peinan, Zhou, Yuanzhe, Zok, Tomasz, Żyła, Adriana, Ren, Aiming, Batey, Robert T., Golden, Barbara L., Huang, Lin, Lilley, David M., Liu, Yijin, Patel, Dinshaw J., Westhof, Eric
Publicado 2020