Rational engineering of sequence specificity in R.MwoI restriction endonuclease

por Skowronek, Krzysztof, Boniecki, Michal J., Kluge, Boguslaw, Bujnicki, Janusz M.
Publicado 2012

SimRNAweb: a web server for RNA 3D structure modeling with optional restraints

por Magnus, Marcin, Boniecki, Michał J., Dawson, Wayne, Bujnicki, Janusz M.
Publicado 2016

S6:S18 ribosomal protein complex interacts with a structural motif present in its own mRNA

por Matelska, Dorota, Purta, Elzbieta, Panek, Sylwia, Boniecki, Michal J., Bujnicki, Janusz M., Dunin-Horkawicz, Stanislaw
Publicado 2013

RNAProbe: a web server for normalization and analysis of RNA structure probing data

por Wirecki, Tomasz K, Merdas, Katarzyna, Bernat, Agata, Boniecki, Michał J, Bujnicki, Janusz M, Stefaniak, Filip
Publicado 2020

SimRNA: a coarse-grained method for RNA folding simulations and 3D structure prediction

por Boniecki, Michal J., Lach, Grzegorz, Dawson, Wayne K., Tomala, Konrad, Lukasz, Pawel, Soltysinski, Tomasz, Rother, Kristian M., Bujnicki, Janusz M.
Publicado 2016

Computational modeling of RNA 3D structures, with the aid of experimental restraints

por Magnus, Marcin, Matelska, Dorota, Łach, Grzegorz, Chojnowski, Grzegorz, Boniecki, Michal J, Purta, Elzbieta, Dawson, Wayne, Dunin-Horkawicz, Stanislaw, Bujnicki, Janusz M
Publicado 2014

RNArchitecture: a database and a classification system of RNA families, with a focus on structural information

por Boccaletto, Pietro, Magnus, Marcin, Almeida, Catarina, Żyła, Adriana, Astha, Astha, Pluta, Radosław, Bagiński, Błażej, Jankowska, Elżbieta, Dunin-Horkawicz, Stanisław, Wirecki, Tomasz K, Boniecki, Michał J, Stefaniak, Filip, Bujnicki, Janusz M
Publicado 2018

RNA-Puzzles Round III: 3D RNA structure prediction of five riboswitches and one ribozyme

por Miao, Zhichao, Adamiak, Ryszard W., Antczak, Maciej, Batey, Robert T., Becka, Alexander J., Biesiada, Marcin, Boniecki, Michał J., Bujnicki, Janusz M., Chen, Shi-Jie, Cheng, Clarence Yu, Chou, Fang-Chieh, Ferré-D'Amaré, Adrian R., Das, Rhiju, Dawson, Wayne K., Ding, Feng, Dokholyan, Nikolay V., Dunin-Horkawicz, Stanisław, Geniesse, Caleb, Kappel, Kalli, Kladwang, Wipapat, Krokhotin, Andrey, Łach, Grzegorz E., Major, François, Mann, Thomas H., Magnus, Marcin, Pachulska-Wieczorek, Katarzyna, Patel, Dinshaw J., Piccirilli, Joseph A., Popenda, Mariusz, Purzycka, Katarzyna J., Ren, Aiming, Rice, Greggory M., Santalucia, John, Sarzynska, Joanna, Szachniuk, Marta, Tandon, Arpit, Trausch, Jeremiah J., Tian, Siqi, Wang, Jian, Weeks, Kevin M., Williams, Benfeard, Xiao, Yi, Xu, Xiaojun, Zhang, Dong, Zok, Tomasz, Westhof, Eric
Publicado 2017

RNA-Puzzles Round IV: 3D structure predictions of four ribozymes and two aptamers

por Miao, Zhichao, Adamiak, Ryszard W., Antczak, Maciej, Boniecki, Michał J., Bujnicki, Janusz, Chen, Shi-Jie, Cheng, Clarence Yu, Cheng, Yi, Chou, Fang-Chieh, Das, Rhiju, Dokholyan, Nikolay V., Ding, Feng, Geniesse, Caleb, Jiang, Yangwei, Joshi, Astha, Krokhotin, Andrey, Magnus, Marcin, Mailhot, Olivier, Major, Francois, Mann, Thomas H., Piątkowski, Paweł, Pluta, Radoslaw, Popenda, Mariusz, Sarzynska, Joanna, Sun, Lizhen, Szachniuk, Marta, Tian, Siqi, Wang, Jian, Wang, Jun, Watkins, Andrew M., Wiedemann, Jakub, Xiao, Yi, Xu, Xiaojun, Yesselman, Joseph D., Zhang, Dong, Zhang, Yi, Zhang, Zhenzhen, Zhao, Chenhan, Zhao, Peinan, Zhou, Yuanzhe, Zok, Tomasz, Żyła, Adriana, Ren, Aiming, Batey, Robert T., Golden, Barbara L., Huang, Lin, Lilley, David M., Liu, Yijin, Patel, Dinshaw J., Westhof, Eric
Publicado 2020