Targeted next-generation sequencing of colorectal cancer identified metastatic specific genetic alterations

por Brannon, A Rose, Vakiani, Efsevia, Scott, Sasinya, Sylvester, Brooke, Kania, Krishan, Viale, Agnes, Solit, David, Berger, Michael
Publicado 2012

PureCN: copy number calling and SNV classification using targeted short read sequencing

por Riester, Markus, Singh, Angad P., Brannon, A. Rose, Yu, Kun, Campbell, Catarina D., Chiang, Derek Y., Morrissey, Michael P.
Publicado 2016

Cell-free RB1 DNA not detected in the blood of pseudoretinoblastoma patients

por Abramson, David H, Mandelker, Diana, Brannon, A Rose, Berger, Michael F, Robbins, Melissa, Dunkel, Ira J, Francis, Jasmine H
Publicado 2022

Molecular analysis of a male breast cancer patient with prolonged stable disease under mTOR/PI3K inhibitors BEZ235/everolimus

por Brannon, A. Rose, Frizziero, Melissa, Chen, David, Hummel, Jennifer, Gallo, Jorge, Riester, Markus, Patel, Parul, Cheung, Wing, Morrissey, Michael, Carbone, Carmine, Cottini, Silvia, Tortora, Giampaolo, Melisi, Davide
Publicado 2016

RB1 Circulating Tumor DNA in the Blood of Patients with Unilateral Retinoblastoma: Before and after Intra-arterial Chemotherapy

por Francis, Jasmine H., Gobin, Y. Pierre, Brannon, A. Rose, Swartzwelder, Christina E., Berger, Michael F., Mandelker, Diana L., Walsh, Michael F., Dunkel, Ira J., Abramson, David H.
Publicado 2021

Detectability of Plasma-Derived Circulating Tumor DNA Panel in Patients Undergoing Primary Treatment for Uveal Melanoma

por Francis, Jasmine H., Barker, Christopher A., Brannon, A. Rose, Canestraro, Julia, Robbins, Melissa, Swartzwelder, Christina E., Levine, Sara, Law, Crystal, Berger, Michael F., Shoushtari, Alexander, Abramson, David H.
Publicado 2022

Ror2, a developmentally regulated kinase, promotes tumor growth potential in renal cell carcinoma

por Wright, Tricia M, Brannon, A Rose, Gordan, John D, Mikels, Amanda J, Mitchell, Cicely, Chen, Shufen, Espinosa, Inigo, van de Rijn, Matt, Pruthi, Raj, Wallen, Eric, Edwards, Lloyd, Nusse, Roel, Rathmell, W Kimryn
Publicado 2009

Variation in chromatin accessibility in human kidney cancer links H3K36 methyltransferase loss with widespread RNA processing defects

por Simon, Jeremy M., Hacker, Kathryn E., Singh, Darshan, Brannon, A. Rose, Parker, Joel S., Weiser, Matthew, Ho, Thai H., Kuan, Pei-Fen, Jonasch, Eric, Furey, Terrence S., Prins, Jan F., Lieb, Jason D., Rathmell, W. Kimryn, Davis, Ian J.
Publicado 2014

CDKN2A/B mutations and allele-specific alterations stratify survival outcomes in IDH-mutant astrocytomas

por Hickman, Richard A., Gedvilaite, Erika, Ptashkin, Ryan, Reiner, Anne S., Cimera, Robert, Nandakumar, Subhiksha, Price, Adam, Vanderbilt, Chad, Fahy, Tara, Young, Robert J., Miller, Alexandra M., Mellinghoff, Ingo K., Rosenblum, Marc K., Ladanyi, Marc, Arcila, Maria E., Zhang, Yanming, Brannon, A. Rose, Bale, Tejus A.
Publicado 2023

Expression of Ror2 Mediates Invasive Phenotypes in Renal Cell Carcinoma

por Rasmussen, Neal R., Debebe, Zufan, Wright, Tricia M., Brooks, Samira A., Sendor, Adam B., Brannon, A . Rose, Hakimi, A . Ari, Hsieh, James J., Choueiri, Toni K., Tamboli, Pheroze, Maranchie, Jodi K., Hinds, Peter, Wallen, Eric M., Simpson, Catherine, Norris, Jacqueline L., Janzen, William P., Rathmell, W. Kimryn
Publicado 2014

Retrospective Evaluation of Somatic Alterations in Cell-Free DNA from Blood in Retinoblastoma

por Abramson, David H., Mandelker, Diana, Francis, Jasmine H., Dunkel, Ira J., Brannon, A. Rose, Benayed, Ryma, Berger, Michael F., Arcila, Maria E., Ladanyi, Marc, Friedman, Danielle Novetsky, Jayakumaran, Gowtham, Diosdado, Monica S., Robbins, Melissa A., Haggag-Lindgren, Dianna, Shukla, Neerav, Walsh, Michael, Kothari, Prachi, Tsui, Dana W.Y.
Publicado 2021

Mutant-RB1 circulating tumor DNA in the blood of unilateral retinoblastoma patients: What happens during enucleation surgery: A pilot study

por Abramson, David H., Mandelker, Diana L., Brannon, A. Rose, Dunkel, Ira J., Benayed, Ryma, Berger, Michael F., Arcila, Maria E., Ladanyi, Marc, Friedman, Danielle Novetsky, Jayakumaran, Gowtham, Diosdado, Monica S., Robbins, Melissa A., Haggag-Lindgren, Dianna, Shukla, Neerav, Walsh, Michael F., Kothari, Prachi, Tsui, Dana W. Y., Francis, Jasmine H.
Publicado 2023

Cell-free DNA captures tumor heterogeneity and driver alterations in rapid autopsies with pre-treated metastatic cancer

por Pereira, Bernard, Chen, Christopher T., Goyal, Lipika, Walmsley, Charlotte, Pinto, Christopher J., Baiev, Islam, Allen, Read, Henderson, Laura, Saha, Supriya, Reyes, Stephanie, Taylor, Martin S., Fitzgerald, Donna M., Broudo, Maida Williams, Sahu, Avinash, Gao, Xin, Winckler, Wendy, Brannon, A. Rose, Engelman, Jeffrey A., Leary, Rebecca, Stone, James R., Campbell, Catarina D., Juric, Dejan
Publicado 2021

Comparative sequencing analysis reveals high genomic concordance between matched primary and metastatic colorectal cancer lesions

por Brannon, A Rose, Vakiani, Efsevia, Sylvester, Brooke E, Scott, Sasinya N, McDermott, Gregory, Shah, Ronak H, Kania, Krishan, Viale, Agnes, Oschwald, Dayna M, Vacic, Vladimir, Emde, Anne-Katrin, Cercek, Andrea, Yaeger, Rona, Kemeny, Nancy E, Saltz, Leonard B, Shia, Jinru, D’Angelica, Michael I, Weiser, Martin R, Solit, David B, Berger, Michael F
Publicado 2014

Molecular analysis of aggressive renal cell carcinoma with unclassified histology reveals distinct subsets

por Chen, Ying-Bei, Xu, Jianing, Skanderup, Anders Jacobsen, Dong, Yiyu, Brannon, A. Rose, Wang, Lu, Won, Helen H., Wang, Patricia I., Nanjangud, Gouri J., Jungbluth, Achim A., Li, Wei, Ojeda, Virginia, Hakimi, A. Ari, Voss, Martin H., Schultz, Nikolaus, Motzer, Robert J., Russo, Paul, Cheng, Emily H., Giancotti, Filippo G., Lee, William, Berger, Michael F., Tickoo, Satish K., Reuter, Victor E., Hsieh, James J.
Publicado 2016

Enhanced clinical assessment of hematologic malignancies through routine paired tumor and normal sequencing

por Ptashkin, Ryan N., Ewalt, Mark D., Jayakumaran, Gowtham, Kiecka, Iwona, Bowman, Anita S., Yao, JinJuan, Casanova, Jacklyn, Lin, Yun-Te David, Petrova-Drus, Kseniya, Mohanty, Abhinita S., Bacares, Ruben, Benhamida, Jamal, Rana, Satshil, Razumova, Anna, Vanderbilt, Chad, Balakrishnan Rema, Anoop, Rijo, Ivelise, Son-Garcia, Julie, de Bruijn, Ino, Zhu, Menglei, Lachhander, Sean, Wang, Wei, Haque, Mohammad S., Seshan, Venkatraman E., Wang, Jiajing, Liu, Ying, Nafa, Khedoudja, Borsu, Laetitia, Zhang, Yanming, Aypar, Umut, Suehnholz, Sarah P., Chakravarty, Debyani, Park, Jae H., Abdel-Wahab, Omar, Mato, Anthony R., Xiao, Wenbin, Roshal, Mikhail, Yabe, Mariko, Batlevi, Connie Lee, Giralt, Sergio, Salles, Gilles, Rampal, Raajit, Tallman, Martin, Stein, Eytan M., Younes, Anas, Levine, Ross L., Perales, Miguel-Angel, van den Brink, Marcel R. M., Dogan, Ahmet, Ladanyi, Marc, Berger, Michael F., Brannon, A. Rose, Benayed, Ryma, Zehir, Ahmet, Arcila, Maria E.
Publicado 2023