Pathways of Distinction Analysis: A New Technique for Multi–SNP Analysis of GWAS Data

por Braun, Rosemary, Buetow, Kenneth
Publicado 2011

Integrative analysis reveals disrupted pathways regulated by microRNAs in cancer

por Wilk, Gary, Braun, Rosemary
Publicado 2018

Time-lagged Ordered Lasso for network inference

por Nguyen, Phan, Braun, Rosemary
Publicado 2018

regQTLs: Single nucleotide polymorphisms that modulate microRNA regulation of gene expression in tumors

por Wilk, Gary, Braun, Rosemary
Publicado 2018

GeneSurrounder: network-based identification of disease genes in expression data

por Shah, Sahil D., Braun, Rosemary
Publicado 2019

TimeCycle: topology inspired method for the detection of cycling transcripts in circadian time-series data

por Ness-Cohn, Elan, Braun, Rosemary
Publicado 2021

Identifying differential correlation in gene/pathway combinations

por Braun, Rosemary, Cope, Leslie, Parmigiani, Giovanni
Publicado 2008

Partition decoupling for multi-gene analysis of gene expression profiling data

por Braun, Rosemary, Leibon, Gregory, Pauls, Scott, Rockmore, Daniel
Publicado 2011

Quantitative analysis of transcriptome dynamics provides novel insights into developmental state transitions

por Johnson, Kristin, Freedman, Simon, Braun, Rosemary, LaBonne, Carole
Publicado 2022

Needles in the Haystack: Identifying Individuals Present in Pooled Genomic Data

por Braun, Rosemary, Rowe, William, Schaefer, Carl, Zhang, Jinghui, Buetow, Kenneth
Publicado 2009

Reconstruction of 3-dimensional tissue organization at the single-cell resolution

por Fu, Yuheng, Das, Arpan, Wang, Dongmei, Braun, Rosemary, Yi, Rui
Publicado 2023

TimeTrial: An Interactive Application for Optimizing the Design and Analysis of Transcriptomic Time-Series Data in Circadian Biology Research

por Ness-Cohn, Elan, Iwanaszko, Marta, Kath, William L., Allada, Ravi, Braun, Rosemary
Publicado 2020

Temperature-driven coordination of circadian transcriptome regulation

por Xu, Bingxian, Hwangbo, Dae-Sung, Saurabh, Sumit, Rosensweig, Clark, Allada, Ravi, Kath, William L., Braun, Rosemary
Publicado 2023

Validation of blood-based transcriptomic circadian phenotyping in older adults

por Smith, S Kendall, Tran, Peter, Madden, Katherine A, Boyd, Jill, Braun, Rosemary, Musiek, Erik S, Ju, Yo-El S
Publicado 2022

Discovery Analysis of TCGA Data Reveals Association between Germline Genotype and Survival in Ovarian Cancer Patients

por Braun, Rosemary, Finney, Richard, Yan, Chunhua, Chen, Qing-Rong, Hu, Ying, Edmonson, Michael, Meerzaman, Daoud, Buetow, Kenneth
Publicado 2013

Mutation, drift and selection in single-driver hematologic malignancy: Example of secondary myelodysplastic syndrome following treatment of inherited neutropenia

por Wojdyla, Tomasz, Mehta, Hrishikesh, Glaubach, Taly, Bertolusso, Roberto, Iwanaszko, Marta, Braun, Rosemary, Corey, Seth J., Kimmel, Marek
Publicado 2019

Acoustic Enhancement of Sleep Slow Oscillations and Concomitant Memory Improvement in Older Adults

por Papalambros, Nelly A., Santostasi, Giovanni, Malkani, Roneil G., Braun, Rosemary, Weintraub, Sandra, Paller, Ken A., Zee, Phyllis C.
Publicado 2017

Multi-SNP Analysis of GWAS Data Identifies Pathways Associated with Nonalcoholic Fatty Liver Disease

por Chen, Qing-Rong, Braun, Rosemary, Hu, Ying, Yan, Chunhua, Brunt, Elizabeth M., Meerzaman, Daoud, Sanyal, Arun J., Buetow, Kenneth
Publicado 2013

Universal method for robust detection of circadian state from gene expression

por Braun, Rosemary, Kath, William L., Iwanaszko, Marta, Kula-Eversole, Elzbieta, Abbott, Sabra M., Reid, Kathryn J., Zee, Phyllis C., Allada, Ravi
Publicado 2018

Dietary Restriction Impacts Peripheral Circadian Clock Output Important for Longevity in Drosophila

por Hwangbo, Dae-Sung, Kwon, Yong-Jae, Iwanaszko, Marta, Jiang, Peng, Abbasi, Ladan, Wright, Nicholas, Alli, Sarayu, Hutchison, Alan L., Dinner, Aaron R., Braun, Rosemary I, Allada, Ravi
Publicado 2023