AntiRef: reference clusters of human antibody sequences

por Briney, Bryan
Publicado 2023

Secondary mechanisms of diversification in the human antibody repertoire

por Briney, Bryan S., Jr., James E. Crowe
Publicado 2013

Comparisons of the antibody repertoires of a humanized rodent and humans by high throughput sequencing

por Joyce, Collin, Burton, Dennis R., Briney, Bryan
Publicado 2020

Human Peripheral Blood Antibodies with Long HCDR3s Are Established Primarily at Original Recombination Using a Limited Subset of Germline Genes

por Briney, Bryan S., Willis, Jordan R., Crowe, James E.
Publicado 2012

Location and length distribution of somatic hypermutation-associated DNA insertions and deletions reveals regions of antibody structural plasticity

por Briney, Bryan S., Willis, Jordan R., Crowe, James E.
Publicado 2012

Clonify: unseeded antibody lineage assignment from next-generation sequencing data

por Briney, Bryan, Le, Khoa, Zhu, Jiang, Burton, Dennis R.
Publicado 2016

Commonality despite exceptional diversity in the baseline human antibody repertoire

por Briney, Bryan, Inderbitzin, Anne, Joyce, Collin, Burton, Dennis R.
Publicado 2019

Human Germline Antibody Gene Segments Encode Polyspecific Antibodies

por Willis, Jordan R., Briney, Bryan S., DeLuca, Samuel L., Crowe, James E., Meiler, Jens
Publicado 2013

Tissue-Specific Expressed Antibody Variable Gene Repertoires

por Briney, Bryan S., Willis, Jordan R., Finn, Jessica A., McKinney, Brett A., Crowe, James E.
Publicado 2014

Correction: Tissue-Specific Expressed Antibody Variable Gene Repertoires

por Briney, Bryan S., Willis, Jordan R., Finn, Jessica A., McKinney, Brett A., Crowe, James E.
Publicado 2020

Efficient isolation of rare B cells using next-generation antigen barcoding

por Hurtado, Jonathan, Flynn, Claudia, Lee, Jeong Hyun, Salcedo, Eugenia C., Cottrell, Christopher A., Skog, Patrick D., Burton, Dennis R., Nemazee, David, Schief, William R., Landais, Elise, Sok, Devin, Briney, Bryan
Publicado 2023

Human Antibodies that Recognize Novel Immunodominant Quaternary Epitopes on the HIV-1 Env Protein

por Hicar, Mark D., Chen, Xuemin, Sulli, Chidananda, Barnes, Trevor, Goodman, Jason, Sojar, Hakimuddin, Briney, Bryan, Willis, Jordan, Chukwuma, Valentine U., Kalams, Spyros A., Doranz, Benjamin J., Spearman, Paul, Crowe, James E.
Publicado 2016

Haplotype-Phased Synthetic Long Reads from Short-Read Sequencing

por Stapleton, James A., Kim, Jeongwoon, Hamilton, John P., Wu, Ming, Irber, Luiz C., Maddamsetti, Rohan, Briney, Bryan, Newton, Linsey, Burton, Dennis R., Brown, C. Titus, Chan, Christina, Buell, C. Robin, Whitehead, Timothy A.
Publicado 2016

Advancing computational biology and bioinformatics research through open innovation competitions

por Blasco, Andrea, Endres, Michael G., Sergeev, Rinat A., Jonchhe, Anup, Macaluso, N. J. Maximilian, Narayan, Rajiv, Natoli, Ted, Paik, Jin H., Briney, Bryan, Wu, Chunlei, Su, Andrew I., Subramanian, Aravind, Lakhani, Karim R.
Publicado 2019

Benchmarking immunoinformatic tools for the analysis of antibody repertoire sequences

por Smakaj, Erand, Babrak, Lmar, Ohlin, Mats, Shugay, Mikhail, Briney, Bryan, Tosoni, Deniz, Galli, Christopher, Grobelsek, Vendi, D’Angelo, Igor, Olson, Branden, Reddy, Sai, Greiff, Victor, Trück, Johannes, Marquez, Susanna, Lees, William, Miho, Enkelejda
Publicado 2020

Mapping Neutralizing Antibody Epitope Specificities to an HIV Env Trimer in Immunized and in Infected Rhesus Macaques

por Zhao, Fangzhu, Joyce, Collin, Burns, Alison, Nogal, Bartek, Cottrell, Christopher A., Ramos, Alejandra, Biddle, Trevor, Pauthner, Matthias, Nedellec, Rebecca, Qureshi, Huma, Mason, Rosemarie, Landais, Elise, Briney, Bryan, Ward, Andrew B., Burton, Dennis R., Sok, Devin
Publicado 2020

Reprogramming the antigen specificity of B cells using genome-editing technologies

por Voss, James E, Gonzalez-Martin, Alicia, Andrabi, Raiees, Fuller, Roberta P, Murrell, Ben, McCoy, Laura E, Porter, Katelyn, Huang, Deli, Li, Wenjuan, Sok, Devin, Le, Khoa, Briney, Bryan, Chateau, Morgan, Rogers, Geoffrey, Hangartner, Lars, Feeney, Ann J, Nemazee, David, Cannon, Paula, Burton, Dennis R
Publicado 2019

Deep repertoire mining uncovers ultra-broad coronavirus neutralizing antibodies targeting multiple spike epitopes

por Hurtado, Jonathan, Rogers, Thomas F., Jaffe, David B., Adams, Bruce A., Bangaru, Sandhya, Garcia, Elijah, Capozzola, Tazio, Messmer, Terrence, Sharma, Pragati, Song, Ge, Beutler, Nathan, He, Wanting, Dueker, Katharina, Musharrafieh, Rami, Stubbington, Michael J.T., Burton, Dennis R., Andrabi, Raiees, Ward, Andrew B., McDonnell, Wyatt J., Briney, Bryan
Publicado 2023

Structural conservation of Lassa virus glycoproteins and recognition by neutralizing antibodies

por Perrett, Hailee R., Brouwer, Philip J.M., Hurtado, Jonathan, Newby, Maddy L., Liu, Lin, Müller-Kräuter, Helena, Müller Aguirre, Sarah, Burger, Judith A., Bouhuijs, Joey H., Gibson, Grace, Messmer, Terrence, Schieffelin, John S., Antanasijevic, Aleksandar, Boons, Geert-Jan, Strecker, Thomas, Crispin, Max, Sanders, Rogier W., Briney, Bryan, Ward, Andrew B.
Publicado 2023

Rapid and Focused Maturation of a VRC01-Class HIV Broadly Neutralizing Antibody Lineage Involves Both Binding and Accommodation of the N276-Glycan

por Umotoy, Jeffrey, Bagaya, Bernard S., Joyce, Collin, Schiffner, Torben, Menis, Sergey, Saye-Francisco, Karen L., Biddle, Trevor, Mohan, Sanjay, Vollbrecht, Thomas, Kalyuzhniy, Oleksander, Madzorera, Sharon, Kitchin, Dale, Lambson, Bronwen, Nonyane, Molati, Kilembe, William, Poignard, Pascal, Schief, William R., Burton, Dennis R., Murrell, Ben, Moore, Penny L., Briney, Bryan, Sok, Devin, Landais, Elise
Publicado 2019