AlienTrimmer removes adapter oligonucleotides with high sensitivity in short-insert paired-end reads. Commentary on Turner (2014) Assessment of insert sizes and adapter content in...

por Criscuolo, Alexis, Brisse, Sylvain
Publicado 2014

Defining genomic epidemiology thresholds for common-source bacterial outbreaks: a modelling study

por Duval, Audrey, Opatowski, Lulla, Brisse, Sylvain
Publicado 2023

Identification of Klebsiella pneumoniae, Klebsiella quasipneumoniae, Klebsiella variicola and Related Phylogroups by MALDI-TOF Mass Spectrometry

por Rodrigues, Carla, Passet, Virginie, Rakotondrasoa, Andriniaina, Brisse, Sylvain
Publicado 2018

Multidrug-resistant toxigenic Corynebacterium diphtheriae sublineage 453 with two novel resistance genomic islands

por Arcari, Gabriele, Hennart, Mélanie, Badell, Edgar, Brisse, Sylvain
Publicado 2023

Complete Genome Sequences of Bordetella pertussis Clinical Isolate FR5810 and Reference Strain Tohama from Combined Oxford Nanopore and Illumina Sequencing

por Bouchez, Valérie, Baines, Sarah Louise, Guillot, Sophie, Brisse, Sylvain
Publicado 2018

The Population Structure of Acinetobacter baumannii: Expanding Multiresistant Clones from an Ancestral Susceptible Genetic Pool

por Diancourt, Laure, Passet, Virginie, Nemec, Alexandr, Dijkshoorn, Lenie, Brisse, Sylvain
Publicado 2010

Genomic evolution of the globally disseminated multidrug-resistant Klebsiella pneumoniae clonal group 147

por Rodrigues, Carla, Desai, Siddhi, Passet, Virginie, Gajjar, Devarshi, Brisse, Sylvain
Publicado 2022

“A Re-Evaluation of M. prototuberculosis”: Continuing the Debate

por Brisse, Sylvain, Supply, Philip, Brosch, Roland, Vincent, Veronique, Gutierrez, M. Cristina
Publicado 2006

Metagenomic assessment of the interplay between the environment and the genetic diversification of Acinetobacter

por Garcia‐Garcera, Marc, Touchon, Marie, Brisse, Sylvain, Rocha, Eduardo P.C.
Publicado 2017

Genus-wide Leptospira core genome multilocus sequence typing for strain taxonomy and global surveillance

por Guglielmini, Julien, Bourhy, Pascale, Schiettekatte, Olivier, Zinini, Farida, Brisse, Sylvain, Picardeau, Mathieu
Publicado 2019

Determining Factors for Pertussis Vaccination Policy: A Study in Five EU Countries

por Wong, Anabelle, Opinel, Annick, Combes, Simon Jean-Baptiste, Toubiana, Julie, Brisse, Sylvain
Publicado 2020

Correction: Genus-wide Leptospira core genome multilocus sequence typing for strain taxonomy and global surveillance

por Guglielmini, Julien, Bourhy, Pascale, Schiettekatte, Olivier, Zinini, Farida, Brisse, Sylvain, Picardeau, Mathieu
Publicado 2020

In Silico Analysis of Usher Encoding Genes in Klebsiella pneumoniae and Characterization of Their Role in Adhesion and Colonization

por Khater, Fida, Balestrino, Damien, Charbonnel, Nicolas, Dufayard, Jean François, Brisse, Sylvain, Forestier, Christiane
Publicado 2015

Community-acquired infection caused by the uncommon hypervirulent Klebsiella pneumoniae ST66-K2 lineage

por Rodrigues, Carla, d’Humières, Camille, Papin, Grégory, Passet, Virginie, Ruppé, Etienne, Brisse, Sylvain
Publicado 2020

Corynebacteria of the diphtheriae Species Complex in Companion Animals: Clinical and Microbiological Characterization of 64 Cases from France

por Museux, Kristina, Arcari, Gabriele, Rodrigo, Guido, Hennart, Melanie, Badell, Edgar, Toubiana, Julie, Brisse, Sylvain
Publicado 2023

Multidrug-resistant Corynebacterium diphtheriae in people with travel history from West Africa to France, March to September 2023

por Brémont, Sylvie, Passet, Virginie, Hennart, Mélanie, Fonteneau, Laure, Toubiana, Julie, Badell, Edgar, Brisse, Sylvain
Publicado 2023

Liver Abscess Caused by Infection with Community-Acquired Klebsiella quasipneumoniae subsp. quasipneumoniae

por Breurec, Sebastien, Melot, Benedicte, Hoen, Bruno, Passet, Virginie, Schepers, Kinda, Bastian, Sylvaine, Brisse, Sylvain
Publicado 2016

The ZKIR Assay, a Real-Time PCR Method for the Detection of Klebsiella pneumoniae and Closely Related Species in Environmental Samples

por Barbier, Elodie, Rodrigues, Carla, Depret, Geraldine, Passet, Virginie, Gal, Laurent, Piveteau, Pascal, Brisse, Sylvain
Publicado 2020

A New Perspective on Listeria monocytogenes Evolution

por Ragon, Marie, Wirth, Thierry, Hollandt, Florian, Lavenir, Rachel, Lecuit, Marc, Le Monnier, Alban, Brisse, Sylvain
Publicado 2008

Virulent Clones of Klebsiella pneumoniae: Identification and Evolutionary Scenario Based on Genomic and Phenotypic Characterization

por Brisse, Sylvain, Fevre, Cindy, Passet, Virginie, Issenhuth-Jeanjean, Sylvie, Tournebize, Régis, Diancourt, Laure, Grimont, Patrick
Publicado 2009