The chemical neighborhood of cells in a diffusion-limited system

por Gesztesi, Juliana, Broddrick, Jared T., Lannin, Timothy, Lee, Jessica A.
Publicado 2023

Integration of physiologically relevant photosynthetic energy flows into whole genome models of light‐driven metabolism

por Broddrick, Jared T., Ware, Maxwell A., Jallet, Denis, Palsson, Bernhard O., Peers, Graham
Publicado 2022

High-Quality Genome-Scale Models From Error-Prone, Long-Read Assemblies

por Broddrick, Jared T., Szubin, Richard, Norsigian, Charles J., Monk, Jonathan M., Palsson, Bernhard O., Parenteau, Mary N.
Publicado 2020

A computational knowledge-base elucidates the response of Staphylococcus aureus to different media types

por Seif, Yara, Monk, Jonathan M., Mih, Nathan, Tsunemoto, Hannah, Poudel, Saugat, Zuniga, Cristal, Broddrick, Jared, Zengler, Karsten, Palsson, Bernhard O.
Publicado 2019

Genome-Scale Model Reveals Metabolic Basis of Biomass Partitioning in a Model Diatom

por Levering, Jennifer, Broddrick, Jared, Dupont, Christopher L., Peers, Graham, Beeri, Karen, Mayers, Joshua, Gallina, Alessandra A., Allen, Andrew E., Palsson, Bernhard O., Zengler, Karsten
Publicado 2016

Red colored IgG4 caused by vitamin B12 from cell culture media combined with disulfide reduction at harvest

por Derfus, Gayle E, Dizon-Maspat, Jemelle, Broddrick, Jared T, Velayo, Arleene C, Toschi, Josh D, Santuray, Rodell T, Hsu, Stephen K, Winter, Charles M, Krishnan, Rajesh, Amanullah, Ashraf
Publicado 2014

Systems biology approach to functionally assess the Clostridioides difficile pangenome reveals genetic diversity with discriminatory power

por Norsigian, Charles J., Danhof, Heather A., Brand, Colleen K., Midani, Firas S., Broddrick, Jared T., Savidge, Tor C., Britton, Robert A., Palsson, Bernhard O., Spinler, Jennifer K., Monk, Jonathan M.
Publicado 2022

Cross‐compartment metabolic coupling enables flexible photoprotective mechanisms in the diatom Phaeodactylum tricornutum

por Broddrick, Jared T., Du, Niu, Smith, Sarah R., Tsuji, Yoshinori, Jallet, Denis, Ware, Maxwell A., Peers, Graham, Matsuda, Yusuke, Dupont, Chris L., Mitchell, B. Greg, Palsson, Bernhard O., Allen, Andrew E.
Publicado 2019

Discovery of Chlorophyll d: Isolation and Characterization of a Far-Red Cyanobacterium from the Original Site of Manning and Strain (1943) at Moss Beach, California

por Kiang, Nancy Y., Swingley, Wesley D., Gautam, Dikshyant, Broddrick, Jared T., Repeta, Daniel J., Stolz, John F., Blankenship, Robert E., Wolf, Benjamin M., Detweiler, Angela M., Miller, Kathy Ann, Schladweiler, Jacob J., Lindeman, Ron, Parenteau, Mary N.
Publicado 2022

Evolution and regulation of nitrogen flux through compartmentalized metabolic networks in a marine diatom

por Smith, Sarah R., Dupont, Chris L., McCarthy, James K., Broddrick, Jared T., Oborník, Miroslav, Horák, Aleš, Füssy, Zoltán, Cihlář, Jaromír, Kleessen, Sabrina, Zheng, Hong, McCrow, John P., Hixson, Kim K., Araújo, Wagner L., Nunes-Nesi, Adriano, Fernie, Alisdair, Nikoloski, Zoran, Palsson, Bernhard O., Allen, Andrew E.
Publicado 2019