Arabidopsis GH3.12 (PBS3) Conjugates Amino Acids to 4-Substituted Benzoates and Is Inhibited by Salicylate

por Okrent, Rachel A., Brooks, Matthew D., Wildermuth, Mary C.
Publicado 2009

OutPredict: multiple datasets can improve prediction of expression and inference of causality

por Cirrone, Jacopo, Brooks, Matthew D., Bonneau, Richard, Coruzzi, Gloria M., Shasha, Dennis E.
Publicado 2020

Author Correction: OutPredict: multiple datasets can improve prediction of expression and inference of causality

por Cirrone, Jacopo, Brooks, Matthew D., Bonneau, Richard, Coruzzi, Gloria M., Shasha, Dennis E.
Publicado 2020

Atomic Force Microscopy of Photosystem II and Its Unit Cell Clustering Quantitatively Delineate the Mesoscale Variability in Arabidopsis Thylakoids

por Onoa, Bibiana, Schneider, Anna R., Brooks, Matthew D., Grob, Patricia, Nogales, Eva, Geissler, Phillip L., Niyogi, Krishna K., Bustamante, Carlos
Publicado 2014

Transient genome-wide interactions of the master transcription factor NLP7 initiate a rapid nitrogen-response cascade

por Alvarez, José M., Schinke, Anna-Lena, Brooks, Matthew D., Pasquino, Angelo, Leonelli, Lauriebeth, Varala, Kranthi, Safi, Alaeddine, Krouk, Gabriel, Krapp, Anne, Coruzzi, Gloria M.
Publicado 2020

ConnecTF: A platform to integrate transcription factor–gene interactions and validate regulatory networks

por Brooks, Matthew D, Juang, Che-Lun, Katari, Manpreet Singh, Alvarez, José M, Pasquino, Angelo, Shih, Hung-Jui, Huang, Ji, Shanks, Carly, Cirrone, Jacopo, Coruzzi, Gloria M
Publicado 2020

Validation of a high-confidence regulatory network for gene-to-NUE phenotype in field-grown rice

por Shanks, Carly M., Huang, Ji, Cheng, Chia-Yi, Shih, Hung-Jui S., Brooks, Matthew D., Alvarez, José M., Araus, Viviana, Swift, Joseph, Henry, Amelia, Coruzzi, Gloria M.
Publicado 2022

Network Walking charts transcriptional dynamics of nitrogen signaling by integrating validated and predicted genome-wide interactions

por Brooks, Matthew D., Cirrone, Jacopo, Pasquino, Angelo V., Alvarez, Jose M., Swift, Joseph, Mittal, Shipra, Juang, Che-Lun, Varala, Kranthi, Gutiérrez, Rodrigo A., Krouk, Gabriel, Shasha, Dennis, Coruzzi, Gloria M.
Publicado 2019

Temporal transcriptional logic of dynamic regulatory networks underlying nitrogen signaling and use in plants

por Varala, Kranthi, Marshall-Colón, Amy, Cirrone, Jacopo, Brooks, Matthew D., Pasquino, Angelo V., Léran, Sophie, Mittal, Shipra, Rock, Tara M., Edwards, Molly B., Kim, Grace J., Ruffel, Sandrine, McCombie, W. Richard, Shasha, Dennis, Coruzzi, Gloria M.
Publicado 2018