Types of ovarian activity in women and their significance: the continuum (a reinterpretation of early findings)

por Brown, James B.
Publicado 2011

Iterative random forests to discover predictive and stable high-order interactions

por Basu, Sumanta, Kumbier, Karl, Brown, James B., Yu, Bin
Publicado 2018

*-DCC: A platform to collect, annotate, and explore a large variety of sequencing experiments

por Hörtenhuber, Matthias, Mukarram, Abdul K, Stoiber, Marcus H, Brown, James B, Daub, Carsten O
Publicado 2020

Promoter Analysis Reveals Globally Differential Regulation of Human Long Non-Coding RNA and Protein-Coding Genes

por Alam, Tanvir, Medvedeva, Yulia A., Jia, Hui, Brown, James B., Lipovich, Leonard, Bajic, Vladimir B.
Publicado 2014

A comprehensive epigenomic analysis of phenotypically distinguishable, genetically identical female and male Daphnia pulex

por Kvist, Jouni, Athanàsio, Camila Gonçalves, Pfrender, Michael E., Brown, James B., Colbourne, John K., Mirbahai, Leda
Publicado 2020

Centromere and kinetochore gene misexpression predicts cancer patient survival and response to radiotherapy and chemotherapy

por Zhang, Weiguo, Mao, Jian-Hua, Zhu, Wei, Jain, Anshu K., Liu, Ke, Brown, James B., Karpen, Gary H.
Publicado 2016

Pattern of DNA Methylation in Daphnia: Evolutionary Perspective

por Kvist, Jouni, Gonçalves Athanàsio, Camila, Shams Solari, Omid, Brown, James B, Colbourne, John K, Pfrender, Michael E, Mirbahai, Leda
Publicado 2018

A novel random forest approach to revealing interactions and controls on chlorophyll concentration and bacterial communities during coastal phytoplankton blooms

por Cheng, Yiwei, Bhoot, Ved N., Kumbier, Karl, Sison-Mangus, Marilou P., Brown, James B., Kudela, Raphael, Newcomer, Michelle E.
Publicado 2021

Age-related gene expression in luminal epithelial cells is driven by a microenvironment made from myoepithelial cells

por Miyano, Masaru, Sayaman, Rosalyn W., Stoiber, Marcus H., Lin, Chun-Han, Stampfer, Martha R., Brown, James B., LaBarge, Mark A.
Publicado 2017

An important class of intron retention events in human erythroblasts is regulated by cryptic exons proposed to function as splicing decoys

por Parra, Marilyn, Booth, Ben W., Weiszmann, Richard, Yee, Brian, Yeo, Gene W., Brown, James B., Celniker, Susan E., Conboy, John G.
Publicado 2018

Genome-guided transcript assembly from integrative analysis of RNA sequence data

por Boley, Nathan, Stoiber, Marcus H., Booth, Benjamin W., Wan, Kenneth H., Hoskins, Roger A., Bickel, Peter J., Celniker, Susan E., Brown, James B.
Publicado 2014

An infrared spectral biomarker accurately predicts neurodegenerative disease class in the absence of overt symptoms

por Lovergne, Lila, Ghosh, Dhruba, Schuck, Renaud, Polyzos, Aris A., Chen, Andrew D., Martin, Michael C., Barnard, Edward S., Brown, James B., McMurray, Cynthia T.
Publicado 2021

Classification of human genomic regions based on experimentally determined binding sites of more than 100 transcription-related factors

por Yip, Kevin Y, Cheng, Chao, Bhardwaj, Nitin, Brown, James B, Leng, Jing, Kundaje, Anshul, Rozowsky, Joel, Birney, Ewan, Bickel, Peter, Snyder, Michael, Gerstein, Mark
Publicado 2012

Modeling gene expression using chromatin features in various cellular contexts

por Dong, Xianjun, Greven, Melissa C, Kundaje, Anshul, Djebali, Sarah, Brown, James B, Cheng, Chao, Gingeras, Thomas R, Gerstein, Mark, Guigó, Roderic, Birney, Ewan, Weng, Zhiping
Publicado 2012

Iron Supplementation Eliminates Antagonistic Interactions Between Root-Associated Bacteria

por Eng, Thomas, Herbert, Robin A., Martinez, Uriel, Wang, Brenda, Chen, Joseph C., Brown, James B., Deutschbauer, Adam M., Bissell, Mina J., Mortimer, Jenny C., Mukhopadhyay, Aindrila
Publicado 2020

Selective time-dependent changes in activity and cell-specific gene expression in human postmortem brain

por Dachet, Fabien, Brown, James B., Valyi-Nagy, Tibor, Narayan, Kunwar D., Serafini, Anna, Boley, Nathan, Gingeras, Thomas R., Celniker, Susan E., Mohapatra, Gayatry, Loeb, Jeffrey A.
Publicado 2021

Identification of genetic factors that modify motor performance and body weight using Collaborative Cross mice

por Mao, Jian-Hua, Langley, Sasha A., Huang, Yurong, Hang, Michael, Bouchard, Kristofer E., Celniker, Susan E., Brown, James B., Jansson, Janet K., Karpen, Gary H., Snijders, Antoine M.
Publicado 2015

Complete Genome Sequence of Agrobacterium sp. Strain 33MFTa1.1, Isolated from Thlaspi arvense Roots

por Langley, Sasha, Eng, Thomas, Wan, Kenneth H., Herbert, Robin A., Klein, Andrew P., Yoshikuni, Yasuo, Tringe, Susannah G., Brown, James B., Celniker, Susan E., Mortimer, Jenny C., Mukhopadhyay, Aindrila
Publicado 2019

Roundup causes embryonic development failure and alters metabolic pathways and gut microbiota functionality in non-target species

por Suppa, Antonio, Kvist, Jouni, Li, Xiaojing, Dhandapani, Vignesh, Almulla, Hanan, Tian, Antoine Y., Kissane, Stephen, Zhou, Jiarui, Perotti, Alessio, Mangelson, Hayley, Langford, Kyle, Rossi, Valeria, Brown, James B., Orsini, Luisa
Publicado 2020

Rhizobacteria Mediate the Phytotoxicity of a Range of Biorefinery‐Relevant Compounds

por Herbert, Robin A., Eng, Thomas, Martinez, Uriel, Wang, Brenda, Langley, Sasha, Wan, Kenneth, Pidatala, Venkataramana, Hoffman, Elijah, Chen, Joseph C., Bissell, Mina J., Brown, James B., Mukhopadhyay, Aindrila, Mortimer, Jenny C.
Publicado 2019