MaxQuant.Live Enables Global Targeting of More Than 25,000 Peptides

por Wichmann, Christoph, Meier, Florian, Virreira Winter, Sebastian, Brunner, Andreas-David, Cox, Jürgen, Mann, Matthias
Publicado 2019

AlphaMap: an open-source Python package for the visual annotation of proteomics data with sequence-specific knowledge

por Voytik, Eugenia, Bludau, Isabell, Willems, Sander, Hansen, Fynn M, Brunner, Andreas-David, Strauss, Maximilian T, Mann, Matthias
Publicado 2021

Deep learning the collisional cross sections of the peptide universe from a million experimental values

por Meier, Florian, Köhler, Niklas D., Brunner, Andreas-David, Wanka, Jean-Marc H., Voytik, Eugenia, Strauss, Maximilian T., Theis, Fabian J., Mann, Matthias
Publicado 2021

Trapped ion mobility spectrometry and PASEF enable in-depth lipidomics from minimal sample amounts

por Vasilopoulou, Catherine G., Sulek, Karolina, Brunner, Andreas-David, Meitei, Ningombam Sanjib, Schweiger-Hufnagel, Ulrike, Meyer, Sven W., Barsch, Aiko, Mann, Matthias, Meier, Florian
Publicado 2020

Reply to “Quality control requirements for the correct annotation of lipidomics data”

por Vasilopoulou, Catherine G., Sulek, Karolina, Brunner, Andreas-David, Meitei, Ningombam Sanjib, Schweiger-Hufnagel, Ulrike, Meyer, Sven W., Barsch, Aiko, Mann, Matthias, Meier, Florian
Publicado 2021

Rapid and In-Depth Coverage of the (Phospho-)Proteome With Deep Libraries and Optimal Window Design for dia-PASEF

por Skowronek, Patricia, Thielert, Marvin, Voytik, Eugenia, Tanzer, Maria C., Hansen, Fynn M., Willems, Sander, Karayel, Ozge, Brunner, Andreas-David, Meier, Florian, Mann, Matthias
Publicado 2022

Online Parallel Accumulation–Serial Fragmentation (PASEF) with a Novel Trapped Ion Mobility Mass Spectrometer

por Meier, Florian, Brunner, Andreas-David, Koch, Scarlet, Koch, Heiner, Lubeck, Markus, Krause, Michael, Goedecke, Niels, Decker, Jens, Kosinski, Thomas, Park, Melvin A., Bache, Nicolai, Hoerning, Ole, Cox, Jürgen, Räther, Oliver, Mann, Matthias
Publicado 2018

Cardiac myocyte miR-29 promotes pathological remodeling of the heart by activating Wnt signaling

por Sassi, Yassine, Avramopoulos, Petros, Ramanujam, Deepak, Grüter, Laurenz, Werfel, Stanislas, Giosele, Simon, Brunner, Andreas-David, Esfandyari, Dena, Papadopoulou, Aikaterini S., De Strooper, Bart, Hübner, Norbert, Kumarswamy, Regalla, Thum, Thomas, Yin, Xiaoke, Mayr, Manuel, Laggerbauer, Bernhard, Engelhardt, Stefan
Publicado 2017

Ultra‐high sensitivity mass spectrometry quantifies single‐cell proteome changes upon perturbation

por Brunner, Andreas‐David, Thielert, Marvin, Vasilopoulou, Catherine, Ammar, Constantin, Coscia, Fabian, Mund, Andreas, Hoerning, Ole B, Bache, Nicolai, Apalategui, Amalia, Lubeck, Markus, Richter, Sabrina, Fischer, David S, Raether, Oliver, Park, Melvin A, Meier, Florian, Theis, Fabian J, Mann, Matthias
Publicado 2022

Robust dimethyl‐based multiplex‐DIA doubles single‐cell proteome depth via a reference channel

por Thielert, Marvin, Itang, Ericka CM, Ammar, Constantin, Rosenberger, Florian A, Bludau, Isabell, Schweizer, Lisa, Nordmann, Thierry M, Skowronek, Patricia, Wahle, Maria, Zeng, Wen‐Feng, Zhou, Xie‐Xuan, Brunner, Andreas‐David, Richter, Sabrina, Levesque, Mitchell P, Theis, Fabian J, Steger, Martin, Mann, Matthias
Publicado 2023

Deep Visual Proteomics defines single-cell identity and heterogeneity

por Mund, Andreas, Coscia, Fabian, Kriston, András, Hollandi, Réka, Kovács, Ferenc, Brunner, Andreas-David, Migh, Ede, Schweizer, Lisa, Santos, Alberto, Bzorek, Michael, Naimy, Soraya, Rahbek-Gjerdrum, Lise Mette, Dyring-Andersen, Beatrice, Bulkescher, Jutta, Lukas, Claudia, Eckert, Mark Adam, Lengyel, Ernst, Gnann, Christian, Lundberg, Emma, Horvath, Peter, Mann, Matthias
Publicado 2022

The Swiss Primary Hypersomnolence and Narcolepsy Cohort study (SPHYNCS): Study protocol for a prospective, multicentre cohort observational study

por Dietmann, Anelia, Wenz, Elena, van der Meer, Julia, Ringli, Maya, Warncke, Jan D., Edwards, Ellen, Schmidt, Markus H., Bernasconi, Corrado A., Nirkko, Arto, Strub, Mathias, Miano, Silvia, Manconi, Mauro, Acker, Jens, von Manitius, Sigrid, Baumann, Christian R., Valko, Philip O., Yilmaz, Bahtiyar, Brunner, Andreas‐David, Tzovara, Athina, Zhang, Zhongxing, Largiadèr, Carlo R., Tafti, Mehdi, Latorre, Daniela, Sallusto, Federica, Khatami, Ramin, Bassetti, Claudio L. A.
Publicado 2021