Performance efficient macromolecular mechanics via sub-nanometer shape based coarse graining

por Bryer, Alexander J., Rey, Juan S., Perilla, Juan R.
Publicado 2023

Full scale structural, mechanical and dynamical properties of HIV-1 liposomes

por Bryer, Alexander J., Reddy, Tyler, Lyman, Edward, Perilla, Juan R.
Publicado 2022

High-Performance Analysis of Biomolecular Containers to Measure Small-Molecule Transport, Transbilayer Lipid Diffusion, and Protein Cavities

por Bryer, Alexander J., Hadden-Perilla, Jodi A., Stone, John E., Perilla, Juan R.
Publicado 2019

Accelerating prediction of chemical shift of protein structures on GPUs: Using OpenACC

por Wright, Eric, Ferrato, Mauricio H., Bryer, Alexander J., Searles, Robert, Perilla, Juan R., Chandrasekaran, Sunita
Publicado 2020

Deep-learning in situ classification of HIV-1 virion morphology

por Rey, Juan S., Li, Wen, Bryer, Alexander J., Beatson, Hagan, Lantz, Christian, Engelman, Alan N., Perilla, Juan R.
Publicado 2021

Coronavirus through Delaware’s Computational Microscope

por Segura, Carolina Pérez, Katyal, Nidhi, González-Arias, Fabio, Bryer, Alexander J., Perilla, Juan R., Hadden-Perilla, Jodi A.
Publicado 2020

Structural basis for the homotypic fusion of chlamydial inclusions by the SNARE-like protein IncA

por Cingolani, Gino, McCauley, Michael, Lobley, Anna, Bryer, Alexander J., Wesolowski, Jordan, Greco, Deanna L., Lokareddy, Ravi K., Ronzone, Erik, Perilla, Juan R., Paumet, Fabienne
Publicado 2019

Recognition of the TDP-43 nuclear localization signal by importin α1/β

por Doll, Steven G., Meshkin, Hamed, Bryer, Alexander J., Li, Fenglin, Ko, Ying-Hui, Lokareddy, Ravi K., Gillilan, Richard E., Gupta, Kushol, Perilla, Juan R., Cingolani, Gino
Publicado 2022

Multidisciplinary studies with mutated HIV-1 capsid proteins reveal structural mechanisms of lattice stabilization

por Gres, Anna T., Kirby, Karen A., McFadden, William M., Du, Haijuan, Liu, Dandan, Xu, Chaoyi, Bryer, Alexander J., Perilla, Juan R., Shi, Jiong, Aiken, Christopher, Fu, Xiaofeng, Zhang, Peijun, Francis, Ashwanth C., Melikyan, Gregory B., Sarafianos, Stefan G.
Publicado 2023