Quantitative Allele-Specific Expression and DNA Methylation Analysis of H19, IGF2 and IGF2R in the Human Placenta across Gestation Reveals H19 Imprinting Plasticity

por Buckberry, Sam, Bianco-Miotto, Tina, Hiendleder, Stefan, Roberts, Claire T.
Publicado 2012

massiR: a method for predicting the sex of samples in gene expression microarray datasets

por Buckberry, Sam, Bent, Stephen J., Bianco-Miotto, Tina, Roberts, Claire T.
Publicado 2014

Transcriptome profiling reveals expression signatures of cranial neural crest cells arising from different axial levels

por Lumb, Rachael, Buckberry, Sam, Secker, Genevieve, Lawrence, David, Schwarz, Quenten
Publicado 2017

Integrative transcriptome meta-analysis reveals widespread sex-biased gene expression at the human fetal–maternal interface

por Buckberry, Sam, Bianco-Miotto, Tina, Bent, Stephen J., Dekker, Gustaaf A., Roberts, Claire T.
Publicado 2014

Large Scale Gene Expression Meta-Analysis Reveals Tissue-Specific, Sex-Biased Gene Expression in Humans

por Mayne, Benjamin T., Bianco-Miotto, Tina, Buckberry, Sam, Breen, James, Clifton, Vicki, Shoubridge, Cheryl, Roberts, Claire T.
Publicado 2016

Recent progress towards understanding the role of DNA methylation in human placental development

por Bianco-Miotto, Tina, Mayne, Benjamin T, Buckberry, Sam, Breen, James, Rodriguez Lopez, Carlos M, Roberts, Claire T
Publicado 2016

Placental transcriptome co-expression analysis reveals conserved regulatory programs across gestation

por Buckberry, Sam, Bianco-Miotto, Tina, Bent, Stephen J., Clifton, Vicki, Shoubridge, Cheryl, Shankar, Kartik, Roberts, Claire T.
Publicado 2017

msgbsR: An R package for analysing methylation-sensitive restriction enzyme sequencing data

por Mayne, Benjamin T., Leemaqz, Shalem Y., Buckberry, Sam, Rodriguez Lopez, Carlos M., Roberts, Claire T., Bianco-Miotto, Tina, Breen, James
Publicado 2018

The effect of Vdr gene ablation on global gene expression in the mouse placenta

por Buckberry, Sam, Spronk, Fleur, Wilson, Rebecca L., Laurence, Jessica A., Bianco-Miotto, Tina, Leemaqz, Shalem, O'Leary, Sean, Anderson, Paul H., Roberts, Claire T.
Publicado 2015

Vitamin D Receptor Gene Ablation in the Conceptus Has Limited Effects on Placental Morphology, Function and Pregnancy Outcome

por Wilson, Rebecca L., Buckberry, Sam, Spronk, Fleur, Laurence, Jessica A., Leemaqz, Shalem, O’Leary, Sean, Bianco-Miotto, Tina, Du, Jing, Anderson, Paul H., Roberts, Claire T.
Publicado 2015

Convergent evolution of a vertebrate-like methylome in a marine sponge

por de Mendoza, Alex, Hatleberg, William L, Pang, Kevin, Leininger, Sven, Bogdanovic, Ozren, Pflueger, Jahnvi, Buckberry, Sam, Technau, Ulrich, Hejnol, Andreas, Adamska, Maja, Degnan, Bernard M, Degnan, Sandie M, Lister, Ryan
Publicado 2019

Large-scale manipulation of promoter DNA methylation reveals context-specific transcriptional responses and stability

por de Mendoza, Alex, Nguyen, Trung Viet, Ford, Ethan, Poppe, Daniel, Buckberry, Sam, Pflueger, Jahnvi, Grimmer, Matthew R., Stolzenburg, Sabine, Bogdanovic, Ozren, Oshlack, Alicia, Farnham, Peggy J., Blancafort, Pilar, Lister, Ryan
Publicado 2022

Recurrent acquisition of cytosine methyltransferases into eukaryotic retrotransposons

por de Mendoza, Alex, Bonnet, Amandine, Vargas-Landin, Dulce B., Ji, Nanjing, Li, Hongfei, Yang, Feng, Li, Ling, Hori, Koichi, Pflueger, Jahnvi, Buckberry, Sam, Ohta, Hiroyuki, Rosic, Nedeljka, Lesage, Pascale, Lin, Senjie, Lister, Ryan
Publicado 2018

Author Correction: Recurrent acquisition of cytosine methyltransferases into eukaryotic retrotransposons

por de Mendoza, Alex, Bonnet, Amandine, Vargas-Landin, Dulce B., Ji, Nanjing, Li, Hongfei, Yang, Feng, Li, Ling, Hori, Koichi, Pflueger, Jahnvi, Buckberry, Sam, Ohta, Hiroyuki, Rosic, Nedeljka, Lesage, Pascale, Lin, Senjie, Lister, Ryan
Publicado 2018

Zinc is a critical regulator of placental morphogenesis and maternal hemodynamics during pregnancy in mice

por Wilson, Rebecca L., Leemaqz, Shalem Y., Goh, Zona, McAninch, Dale, Jankovic-Karasoulos, Tanja, Leghi, Gabriela E., Phillips, Jessica A., Colafella, Katrina Mirabito, Tran, Cuong, O’Leary, Sean, Buckberry, Sam, Pederson, Stephen, Robertson, Sarah A., Bianco-Miotto, Tina, Roberts, Claire T.
Publicado 2017

The emergence of the brain non-CpG methylation system in vertebrates

por de Mendoza, Alex, Poppe, Daniel, Buckberry, Sam, Pflueger, Jahnvi, Albertin, Caroline B., Daish, Tasman, Bertrand, Stephanie, de la Calle-Mustienes, Elisa, Gomez-Skarmeta, Jose Luis, Nery, Joseph R., Ecker, Joseph R., Baer, Boris, Ragsdale, Clifton W., Grützner, Frank, Escriva, Hector, Venkatesh, Byrappa, Bogdanovic, Ozren, Lister, Ryan
Publicado 2021

Transient naive reprogramming corrects hiPS cells functionally and epigenetically

por Buckberry, Sam, Liu, Xiaodong, Poppe, Daniel, Tan, Jia Ping, Sun, Guizhi, Chen, Joseph, Nguyen, Trung Viet, de Mendoza, Alex, Pflueger, Jahnvi, Frazer, Thomas, Vargas-Landín, Dulce B., Paynter, Jacob M., Smits, Nathan, Liu, Ning, Ouyang, John F., Rossello, Fernando J., Chy, Hun S., Rackham, Owen J. L., Laslett, Andrew L., Breen, James, Faulkner, Geoffrey J., Nefzger, Christian M., Polo, Jose M., Lister, Ryan
Publicado 2023

Transcriptional signature in microglia associated with Aβ plaque phagocytosis

por Grubman, Alexandra, Choo, Xin Yi, Chew, Gabriel, Ouyang, John F., Sun, Guizhi, Croft, Nathan P., Rossello, Fernando J., Simmons, Rebecca, Buckberry, Sam, Landin, Dulce Vargas, Pflueger, Jahnvi, Vandekolk, Teresa H., Abay, Zehra, Zhou, Yichen, Liu, Xiaodong, Chen, Joseph, Larcombe, Michael, Haynes, John M., McLean, Catriona, Williams, Sarah, Chai, Siew Yeen, Wilson, Trevor, Lister, Ryan, Pouton, Colin W., Purcell, Anthony W., Rackham, Owen J. L., Petretto, Enrico, Polo, Jose M.
Publicado 2021