A novel approach for resolving differences in single-cell gene expression patterns from zygote to blastocyst

por Buettner, Florian, Theis, Fabian J.
Publicado 2012

A modular framework for gene set analysis integrating multilevel omics data

por Sass, Steffen, Buettner, Florian, Mueller, Nikola S., Theis, Fabian J.
Publicado 2013

Probabilistic PCA of censored data: accounting for uncertainties in the visualization of high-throughput single-cell qPCR data

por Buettner, Florian, Moignard, Victoria, Göttgens, Berthold, Theis, Fabian J.
Publicado 2014

Unbiased Prediction and Feature Selection in High-Dimensional Survival Regression

por Laimighofer, Michael, Krumsiek, Jan, Buettner, Florian, Theis, Fabian J.
Publicado 2016

Design and Selection of Machine Learning Methods Using Radiomics and Dosiomics for Normal Tissue Complication Probability Modeling of Xerostomia

por Gabryś, Hubert S., Buettner, Florian, Sterzing, Florian, Hauswald, Henrik, Bangert, Mark
Publicado 2018

f-scLVM: scalable and versatile factor analysis for single-cell RNA-seq

por Buettner, Florian, Pratanwanich, Naruemon, McCarthy, Davis J., Marioni, John C., Stegle, Oliver
Publicado 2017

Ano-rectal wall dose-surface maps localize the dosimetric benefit of hydrogel rectum spacers in prostate cancer radiotherapy

por Vanneste, Ben G.L., Buettner, Florian, Pinkawa, Michael, Lambin, Philippe, Hoffmann, Aswin L.
Publicado 2018

Multi‐Omics Factor Analysis—a framework for unsupervised integration of multi‐omics data sets

por Argelaguet, Ricard, Velten, Britta, Arnol, Damien, Dietrich, Sascha, Zenz, Thorsten, Marioni, John C, Buettner, Florian, Huber, Wolfgang, Stegle, Oliver
Publicado 2018

S105: CLONAL DIFFERENTIATION TRAJECTORIES OF ADULT ACUTE LYMPHOBLASTIC LEUKEMIA AT SINGLE CELL LEVEL

por Geßner, Alec, Jolly, Adrien, Sijmonsma, Tjeerd, Yu, Weijia, Abou-El-Ardat, Khalil, Kaulich, Manuel, Guenther, Stefan, Lang, Fabian, Buettner, Florian, Rieger, Michael
Publicado 2023

Single-cell transcriptomic reconstruction reveals cell cycle and multi-lineage differentiation defects in Bcl11a-deficient hematopoietic stem cells

por Tsang, Jason C. H., Yu, Yong, Burke, Shannon, Buettner, Florian, Wang, Cui, Kolodziejczyk, Aleksandra A., Teichmann, Sarah A., Lu, Liming, Liu, Pentao
Publicado 2015

Metabolic regulation of pluripotency and germ cell fate through α‐ketoglutarate

por Tischler, Julia, Gruhn, Wolfram H, Reid, John, Allgeyer, Edward, Buettner, Florian, Marr, Carsten, Theis, Fabian, Simons, Ben D, Wernisch, Lorenz, Surani, M Azim
Publicado 2018

Single cell analyses identify a highly regenerative and homogenous human CD34+ hematopoietic stem cell population

por Anjos-Afonso, Fernando, Buettner, Florian, Mian, Syed A., Rhys, Hefin, Perez-Lloret, Jimena, Garcia-Albornoz, Manuel, Rastogi, Namrata, Ariza-McNaughton, Linda, Bonnet, Dominique
Publicado 2022

Prospective identification of hematopoietic lineage choice by deep learning

por Buggenthin, Felix, Buettner, Florian, Hoppe, Philipp S, Endele, Max, Kroiss, Manuel, Strasser, Michael, Schwarzfischer, Michael, Loeffler, Dirk, Kokkaliaris, Konstantinos D, Hilsenbeck, Oliver, Schroeder, Timm, Theis, Fabian J, Marr, Carsten
Publicado 2017

Characterisation of transcriptional networks in blood stem and progenitor cells using high-throughput single cell gene expression analysis

por Moignard, Victoria, Macaulay, Iain C., Swiers, Gemma, Buettner, Florian, Schütte, Judith, Calero-Nieto, Fernando J., Kinston, Sarah, Joshi, Anagha, Hannah, Rebecca, Theis, Fabian J., Jacobsen, Sten Eirik, de Bruijn, Marella, Göttgens, Berthold
Publicado 2013

Decoding the Regulatory Network for Blood Development from Single-Cell Gene Expression Measurements

por Moignard, Victoria, Woodhouse, Steven, Haghverdi, Laleh, Lilly, Andrew J., Tanaka, Yosuke, Wilkinson, Adam C., Buettner, Florian, Macaulay, Iain C., Jawaid, Wajid, Diamanti, Evangelia, Nishikawa, Shin-Ichi, Piterman, Nir, Kouskoff, Valerie, Theis, Fabian J., Fisher, Jasmin, Göttgens, Berthold
Publicado 2015

Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression

por Cuomo, Anna S. E., Seaton, Daniel D., McCarthy, Davis J., Martinez, Iker, Bonder, Marc Jan, Garcia-Bernardo, Jose, Amatya, Shradha, Madrigal, Pedro, Isaacson, Abigail, Buettner, Florian, Knights, Andrew, Natarajan, Kedar Nath, Vallier, Ludovic, Marioni, John C., Chhatriwala, Mariya, Stegle, Oliver
Publicado 2020

Publisher Correction: Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression

por Cuomo, Anna S. E., Seaton, Daniel D., McCarthy, Davis J., Martinez, Iker, Bonder, Marc Jan, Garcia-Bernardo, Jose, Amatya, Shradha, Madrigal, Pedro, Isaacson, Abigail, Buettner, Florian, Knights, Andrew, Natarajan, Kedar Nath, Vallier, Ludovic, Marioni, John C., Chhatriwala, Mariya, Stegle, Oliver
Publicado 2020

Combined Single-Cell Functional and Gene Expression Analysis Resolves Heterogeneity within Stem Cell Populations

por Wilson, Nicola K., Kent, David G., Buettner, Florian, Shehata, Mona, Macaulay, Iain C., Calero-Nieto, Fernando J., Sánchez Castillo, Manuel, Oedekoven, Caroline A., Diamanti, Evangelia, Schulte, Reiner, Ponting, Chris P., Voet, Thierry, Caldas, Carlos, Stingl, John, Green, Anthony R., Theis, Fabian J., Göttgens, Berthold
Publicado 2015

Multi-omics profiling of mouse gastrulation at single cell resolution

por Argelaguet, Ricard, Clark, Stephen J, Mohammed, Hisham, Stapel, L Carine, Krueger, Christel, Kapourani, Chantriolnt-Andreas, Imaz-Rosshandler, Ivan, Lohoff, Tim, Xiang, Yunlong, Hanna, Courtney W, Smallwood, Sebastien, Ibarra-Soria, Ximena, Buettner, Florian, Sanguinetti, Guido, Xie, Wei, Krueger, Felix, Göttgens, Berthold, Rugg-Gunn, Peter J., Kelsey, Gavin, Dean, Wendy, Nichols, Jennifer, Stegle, Oliver, Marioni, John C, Reik, Wolf
Publicado 2019

Understanding metric-related pitfalls in image analysis validation

por REINKE, ANNIKA, TIZABI, MINU D., BAUMGARTNER, MICHAEL, EISENMANN, MATTHIAS, HECKMANN-NÖTZEL, DOREEN, KAVUR, A. EMRE, RÄDSCH, TIM, SUDRE, CAROLE H., ACION, LAURA, ANTONELLI, MICHELA, ARBEL, TAL, BAKAS, SPYRIDON, BENIS, ARRIEL, BLASCHKO, MATTHEW B., BUETTNER, FLORIAN, CARDOSO, M. JORGE, CHEPLYGINA, VERONIKA, CHEN, JIANXU, CHRISTODOULOU, EVANGELIA, CIMINI, BETH A., COLLINS, GARY S., FARAHANI, KEYVAN, FERRER, LUCIANA, GALDRAN, ADRIAN, VAN GINNEKEN, BRAM, GLOCKER, BEN, GODAU, PATRICK, HAASE, ROBERT, HASHIMOTO, DANIEL A., HOFFMAN, MICHAEL M., HUISMAN, MEREL, ISENSEE, FABIAN, JANNIN, PIERRE, KAHN, CHARLES E., KAINMUELLER, DAGMAR, KAINZ, BERNHARD, KARARGYRIS, ALEXANDROS, KARTHIKESALINGAM, ALAN, KENNGOTT, HANNES, KLEESIEK, JENS, KOFLER, FLORIAN, KOOI, THIJS, KOPP-SCHNEIDER, ANNETTE, KOZUBEK, MICHAL, KRESHUK, ANNA, KURC, TAHSIN, LANDMAN, BENNETT A., LITJENS, GEERT, MADANI, AMIN, MAIER-HEIN, KLAUS, MARTEL, ANNE L., MATTSON, PETER, MEIJERING, ERIK, MENZE, BJOERN, MOONS, KAREL G.M., MÜLLER, HENNING, NICHYPORUK, BRENNAN, NICKEL, FELIX, PETERSEN, JENS, RAFELSKI, SUSANNE M., RAJPOOT, NASIR, REYES, MAURICIO, RIEGLER, MICHAEL A., RIEKE, NICOLA, SAEZ-RODRIGUEZ, JULIO, SÁNCHEZ, CLARA I., SHETTY, SHRAVYA, SUMMERS, RONALD M., TAHA, ABDEL A., TIULPIN, ALEKSEI, TSAFTARIS, SOTIRIOS A., VAN CALSTER, BEN, VAROQUAUX, GAËL, YANIV, ZIV R., JÄGER, PAUL F., MAIER-HEIN, LENA
Publicado 2023