An unusual mechanism for EF-Tu activation during tmRNA-mediated ribosome rescue

por Miller, Mickey R., Buskirk, Allen R.
Publicado 2014

The SmpB C-terminal tail helps tmRNA to recognize and enter stalled ribosomes

por Miller, Mickey R., Buskirk, Allen R.
Publicado 2014

A ribosome profiling study of mRNA cleavage by the endonuclease RelE

por Hwang, Jae-Yeon, Buskirk, Allen R.
Publicado 2017

A systematically-revised ribosome profiling method for bacteria reveals pauses at single-codon resolution

por Mohammad, Fuad, Green, Rachel, Buskirk, Allen R
Publicado 2019

Translational initiation in E. coli occurs at the correct sites genome-wide in the absence of mRNA-rRNA base-pairing

por Saito, Kazuki, Green, Rachel, Buskirk, Allen R
Publicado 2020

Ribosome recycling is not critical for translational coupling in Escherichia coli

por Saito, Kazuki, Green, Rachel, Buskirk, Allen R
Publicado 2020

Riboformer: A Deep Learning Framework for Predicting Context-Dependent Translation Dynamics

por Shao, Bin, Yan, Jiawei, Zhang, Jing, Buskirk, Allen R.
Publicado 2023

Identifying Small Proteins by Ribosome Profiling with Stalled Initiation Complexes

por Weaver, Jeremy, Mohammad, Fuad, Buskirk, Allen R., Storz, Gisela
Publicado 2019

Rejection of tmRNA·SmpB after GTP hydrolysis by EF-Tu on ribosomes stalled on intact mRNA

por Kurita, Daisuke, Miller, Mickey R., Muto, Akira, Buskirk, Allen R., Himeno, Hyouta
Publicado 2014

The role of upstream sequences in selecting the reading frame on tmRNA

por Miller, Mickey R, Healey, David W, Robison, Stephen G, Dewey, Jonathan D, Buskirk, Allen R
Publicado 2008

Ribosome profiling in archaea reveals leaderless translation, novel translational initiation sites, and ribosome pausing at single codon resolution

por Gelsinger, Diego Rivera, Dallon, Emma, Reddy, Rahul, Mohammad, Fuad, Buskirk, Allen R, DiRuggiero, Jocelyne
Publicado 2020

Loss of N(1)-methylation of G37 in tRNA induces ribosome stalling and reprograms gene expression

por Masuda, Isao, Hwang, Jae-Yeon, Christian, Thomas, Maharjan, Sunita, Mohammad, Fuad, Gamper, Howard, Buskirk, Allen R, Hou, Ya-Ming
Publicado 2021

B. subtilis MutS2 splits stalled ribosomes into subunits without mRNA cleavage

por Park, Esther, Mackens-Kiani, Timur, Berhane, Rebekah, Esser, Hanna, Erdenebat, Chimeg, Burroughs, A. Maxwell, Berninghausen, Otto, Aravind, L., Beckmann, Roland, Green, Rachel, Buskirk, Allen R.
Publicado 2023