LeView: automatic and interactive generation of 2D diagrams for biomacromolecule/ligand interactions

por Caboche, Ségolène
Publicado 2013

High-Throughput Sequencing, a Versatile Weapon to Support Genome-Based Diagnosis in Infectious Diseases: Applications to Clinical Bacteriology

por Caboche, Ségolène, Audebert, Christophe, Hot, David
Publicado 2014

CuReSim-LoRM: A Tool to Simulate Metabarcoding Long Reads

por Mesloub, Yasmina, Beury, Delphine, Vandermeeren, Félix, Caboche, Ségolène
Publicado 2023

Comparison of mapping algorithms used in high-throughput sequencing: application to Ion Torrent data

por Caboche, Ségolène, Audebert, Christophe, Lemoine, Yves, Hot, David
Publicado 2014

Structural pattern matching of nonribosomal peptides

por Caboche, Ségolène, Pupin, Maude, Leclère, Valérie, Jacques, Phillipe, Kucherov, Gregory
Publicado 2009

A new fingerprint to predict nonribosomal peptides activity

por Abdo, Ammar, Caboche, Ségolène, Leclère, Valérie, Jacques, Philippe, Pupin, Maude
Publicado 2012

MICRA: an automatic pipeline for fast characterization of microbial genomes from high-throughput sequencing data

por Caboche, Ségolène, Even, Gaël, Loywick, Alexandre, Audebert, Christophe, Hot, David
Publicado 2017

NORINE: a database of nonribosomal peptides

por Caboche, Ségolène, Pupin, Maude, Leclère, Valérie, Fontaine, Arnaud, Jacques, Philippe, Kucherov, Gregory
Publicado 2008

Assessment of Common and Emerging Bioinformatics Pipelines for Targeted Metagenomics

por Siegwald, Léa, Touzet, Hélène, Lemoine, Yves, Hot, David, Audebert, Christophe, Caboche, Ségolène
Publicado 2017

Targeted metagenomic sequencing data of human gut microbiota associated with Blastocystis colonization

por Siegwald, Léa, Audebert, Christophe, Even, Gaël, Viscogliosi, Eric, Caboche, Ségolène, Chabé, Magali
Publicado 2017

The Impact of Bioinformatics Pipelines on Microbiota Studies: Does the Analytical “Microscope” Affect the Biological Interpretation?

por Siegwald, Léa, Caboche, Ségolène, Even, Gaël, Viscogliosi, Eric, Audebert, Christophe, Chabé, Magali
Publicado 2019

A complete protocol for whole-genome sequencing of virus from clinical samples: Application to coronavirus OC43

por Maurier, Florence, Beury, Delphine, Fléchon, Léa, Varré, Jean-Stéphane, Touzet, Hélène, Goffard, Anne, Hot, David, Caboche, Ségolène
Publicado 2019

Use of whole-genome sequencing in the molecular investigation of care-associated HCoV-OC43 infections in a hematopoietic stem cell transplant unit

por Beury, Delphine, Fléchon, Léa, Maurier, Florence, Caboche, Ségolène, Varré, Jean-Stéphane, Touzet, Hélène, Faure, Karine, Dubuisson, Jean, Hot, David, Guery, Benoit, Goffard, Anne
Publicado 2020

Primary transcriptome analysis reveals importance of IS elements for the shaping of the transcriptional landscape of Bordetella pertussis

por Amman, Fabian, D'Halluin, Alexandre, Antoine, Rudy, Huot, Ludovic, Bibova, Ilona, Keidel, Kristina, Slupek, Stéphanie, Bouquet, Peggy, Coutte, Loïc, Caboche, Ségolène, Locht, Camille, Vecerek, Branislav, Hot, David
Publicado 2018

Genetic basis for virulence differences of various Cryptosporidium parvum carcinogenic isolates

por Audebert, Christophe, Bonardi, Franck, Caboche, Ségolène, Guyot, Karine, Touzet, Hélène, Merlin, Sophie, Gantois, Nausicaa, Creusy, Colette, Meloni, Dionigia, Mouray, Anthony, Viscogliosi, Eric, Certad, Gabriela, Benamrouz-Vanneste, Sadia, Chabé, Magali
Publicado 2020

Modelling the Impact of Chronic Cigarette Smoke Exposure in Obese Mice: Metabolic, Pulmonary, Intestinal, and Cardiac Issues

por Dubois-Deruy, Emilie, Rémy, Gaëlle, Alard, Jeanne, Kervoaze, Gwenola, Chwastyniak, Maggy, Baron, Morgane, Beury, Delphine, Siegwald, Léa, Caboche, Ségolène, Hot, David, Gosset, Philippe, Grangette, Corinne, Pinet, Florence, Wolowczuk, Isabelle, Pichavant, Muriel
Publicado 2020

Erratum: Rémy et al. Modelling the Impact of Chronic Cigarette Smoke Exposure in Obese Mice: Metabolic, Pulmonary, Intestinal, and Cardiac Issues. Nutrients 2020, 12, 827

por Rémy, Gaëlle, Dubois-Deruy, Emilie, Alard, Jeanne, Kervoaze, Gwenola, Chwastyniak, Maggy, Baron, Morgane, Beury, Delphine, Siegwald, Léa, Caboche, Ségolène, Hot, David, Gosset, Philippe, Grangette, Corinne, Pinet, Florence, Wolowczuk, Isabelle, Pichavant, Muriel
Publicado 2021

Murine in utero exposure to simulated complex urban air pollution disturbs offspring gut maturation and microbiota during intestinal suckling-to-weaning transition in a sex-depende...

por Guilloteau, Eva, Coll, Patrice, Lu, Zhuyi, Djouina, Madjid, Cazaunau, Mathieu, Waxin, Christophe, Bergé, Antonin, Caboche, Ségolène, Gratien, Aline, Al Marj, Elie, Hot, David, Dubuquoy, Laurent, Launay, David, Vignal, Cécile, Lanone, Sophie, Body-Malapel, Mathilde
Publicado 2022

PDBe: Protein Data Bank in Europe

por Velankar, Sameer, Alhroub, Younes, Alili, Anaëlle, Best, Christoph, Boutselakis, Harry C., Caboche, Ségolène, Conroy, Matthew J., Dana, Jose M., van Ginkel, Glen, Golovin, Adel, Gore, Swanand P., Gutmanas, Aleksandras, Haslam, Pauline, Hirshberg, Miriam, John, Melford, Lagerstedt, Ingvar, Mir, Saqib, Newman, Laurence E., Oldfield, Tom J., Penkett, Chris J., Pineda-Castillo, Jorge, Rinaldi, Luana, Sahni, Gaurav, Sawka, Grégoire, Sen, Sanchayita, Slowley, Robert, Sousa da Silva, Alan Wilter, Suarez-Uruena, Antonio, Swaminathan, G. Jawahar, Symmons, Martyn F., Vranken, Wim F., Wainwright, Michael, Kleywegt, Gerard J.
Publicado 2011