Mining Virulence Genes Using Metagenomics

por Belda-Ferre, Pedro, Cabrera-Rubio, Raúl, Moya, Andrés, Mira, Alex
Publicado 2011

Cholestasis induced by bile duct ligation promotes changes in the intestinal microbiome in mice

por Cabrera-Rubio, Raul, Patterson, Angela M., Cotter, Paul D., Beraza, Naiara
Publicado 2019

Outbreak of acute larval cyathostominosis – A “perfect storm” of inflammation and dysbiosis

por Walshe, Nicola, Mulcahy, Grace, Crispie, Fiona, Cabrera‐Rubio, Raul, Cotter, Paul, Jahns, Hanne, Duggan, Vivienne
Publicado 2020

Maternal-infant antibiotic resistance genes transference: what do we know?

por Samarra, Anna, Esteban-Torres, Maria, Cabrera-Rubio, Raul, Bernabeu, Manuel, Arboleya, Silvia, Gueimonde, Miguel, Collado, Maria Carmen
Publicado 2023

Human milk microbiota: what did we learn in the last 20 years?

por Selma-Royo, Marta, Calvo-Lerma, Joaquim, Bäuerl, Christine, Esteban-Torres, Maria, Cabrera-Rubio, Raul, Collado, Maria Carmen
Publicado 2022

Diversity of the Microbiota of Traditional Izmir Tulum and Izmir Brined Tulum Cheeses and Selection of Potential Probiotics

por Güley, Ziba, Fallico, Vincenzo, Cabrera-Rubio, Raul, O’Sullivan, Daniel, Marotta, Mariarosaria, Pennone, Vincenzo, Smith, Sandra, Beresford, Tom
Publicado 2023

Age‐ and duration‐dependent effects of whey protein on high‐fat diet‐induced changes in body weight, lipid metabolism, and gut microbiota in mice

por Boscaini, Serena, Cabrera‐Rubio, Raul, Nychyk, Oleksandr, Roger Speakman, John, Francis Cryan, John, David Cotter, Paul, Nilaweera, Kanishka N.
Publicado 2020

Rapid Increase of Oral Bacteria in Nasopharyngeal Microbiota After Antibiotic Treatment in Children With Invasive Pneumococcal Disease

por Henares, Desiree, Rocafort, Muntsa, Brotons, Pedro, de Sevilla, Mariona F., Mira, Alex, Launes, Cristian, Cabrera-Rubio, Raul, Muñoz-Almagro, Carmen
Publicado 2021

Using Shotgun Sequencing to Describe the Changes Induced by In-Feed Zinc Oxide and Apramycin in the Microbiomes of Pigs One Week Postweaning

por Ortiz Sanjuán, Juan M., Manzanilla, Edgar G., Cabrera-Rubio, Raúl, Crispie, Fiona, Cotter, Paul D., Garrido, Juan J., Argüello, Héctor
Publicado 2022

The Human Mesenteric Lymph Node Microbiome Differentiates Between Crohn’s Disease and Ulcerative Colitis

por Kiernan, Miranda G, Coffey, J Calvin, McDermott, Kieran, Cotter, Paul D, Cabrera-Rubio, Raul, Kiely, Patrick A, Dunne, Colum P
Publicado 2019

A Multiomic Approach to Investigate the Effects of a Weight Loss Program on the Intestinal Health of Overweight Horses

por Walshe, Nicola, Cabrera-Rubio, Raul, Collins, Roisin, Puggioni, Antonella, Gath, Vivian, Crispie, Fiona, Cotter, Paul D., Brennan, Lorraine, Mulcahy, Grace, Duggan, Vivienne
Publicado 2021

Depletion of the gut microbiota differentially affects the impact of whey protein on high‐fat diet‐induced obesity and intestinal permeability

por Boscaini, Serena, Cabrera‐Rubio, Raul, Golubeva, Anna, Nychyk, Oleksandr, Fülling, Christine, Speakman, John R., Cotter, Paul D., Cryan, John F., Nilaweera, Kanishka N.
Publicado 2021

Lactobacillus salivarius UCC118™ Dampens Inflammation and Promotes Microbiota Recovery to Provide Therapeutic Benefit in a DSS-Induced Colitis Model

por Iyer, Namrata, Williams, Michelle A., O’Callaghan, Amy A., Dempsey, Elaine, Cabrera-Rubio, Raul, Raverdeau, Mathilde, Crispie, Fiona, Cotter, Paul D., Corr, Sinéad C.
Publicado 2022

Differential nasopharyngeal microbiota composition in children according to respiratory health status

por Henares, Desiree, Brotons, Pedro, de Sevilla, Mariona F., Fernandez-Lopez, Ana, Hernandez-Bou, Susanna, Perez-Argüello, Amaresh, Mira, Alex, Muñoz-Almagro, Carmen, Cabrera-Rubio, Raul
Publicado 2021

Genome-Wide Profiling of Enterotoxigenic Staphylococcus aureus Strains Used for the Production of Naturally Contaminated Cheeses

por Macori, Guerrino, Bellio, Alberto, Bianchi, Daniela Manila, Chiesa, Francesco, Gallina, Silvia, Romano, Angelo, Zuccon, Fabio, Cabrera-Rubio, Raúl, Cauquil, Alexandra, Merda, Déborah, Auvray, Fréderic, Decastelli, Lucia
Publicado 2019

Fermented-Food Metagenomics Reveals Substrate-Associated Differences in Taxonomy and Health-Associated and Antibiotic Resistance Determinants

por Leech, John, Cabrera-Rubio, Raul, Walsh, Aaron M., Macori, Guerrino, Walsh, Calum J., Barton, Wiley, Finnegan, Laura, Crispie, Fiona, O’Sullivan, Orla, Claesson, Marcus J., Cotter, Paul D.
Publicado 2020

Oral Delivery of Nisin in Resistant Starch Based Matrices Alters the Gut Microbiota in Mice

por Gough, Ronan, Cabrera Rubio, Raúl, O'Connor, Paula M., Crispie, Fiona, Brodkorb, André, Miao, Song, Hill, Colin, Ross, Reynolds P., Cotter, Paul D., Nilaweera, Kanishka N., Rea, Mary C.
Publicado 2018

Antimicrobial use and production system shape the fecal, environmental, and slurry resistomes of pig farms

por Mencía-Ares, Oscar, Cabrera-Rubio, Raúl, Cobo-Díaz, José Francisco, Álvarez-Ordóñez, Avelino, Gómez-García, Manuel, Puente, Héctor, Cotter, Paul D., Crispie, Fiona, Carvajal, Ana, Rubio, Pedro, Argüello, Héctor
Publicado 2020

Porcine reproductive and respiratory syndrome virus impacts on gut microbiome in a strain virulence‐dependent fashion

por Argüello, Héctor, Rodríguez‐Gómez, Irene Magdalena, Sánchez‐Carvajal, Jose María, Pallares, Francisco José, Díaz, Iván, Cabrera‐Rubio, Raúl, Crispie, Fiona, Cotter, Paul D., Mateu, Enric, Martín‐Valls, Gerard, Carrasco, Librado, Gómez‐Laguna, Jaime
Publicado 2021

Short-term consumption of a high-fat diet increases host susceptibility to Listeria monocytogenes infection

por Heras, Vanessa Las, Clooney, Adam G., Ryan, Feargal J., Cabrera-Rubio, Raul, Casey, Pat G., Hueston, Cara M., Pinheiro, Jorge, Rudkin, Justine K., Melgar, Silvia, Cotter, Paul D., Hill, Colin, Gahan, Cormac G. M.
Publicado 2019