Prediction of specificity-determining residues for small-molecule kinase inhibitors

por Caffrey, Daniel R, Lunney, Elizabeth A, Moshinsky, Deborah J
Publicado 2008

The domain structure and distribution of Alu elements in long noncoding RNAs and mRNAs

por Kim, Eugene Z., Wespiser, Adam R., Caffrey, Daniel R.
Publicado 2016

AIM2 recognizes cytosolic dsDNA and forms a caspase-1 activating inflammasome with ASC

por Hornung, Veit, Ablasser, Andrea, Charrel-Dennis, Marie, Bauernfeind, Franz, Horvath, Gabor, Caffrey, Daniel R., Latz, Eicke, Fitzgerald, Katherine A.
Publicado 2009

siRNA Off-Target Effects Can Be Reduced at Concentrations That Match Their Individual Potency

por Caffrey, Daniel R., Zhao, Juan, Song, Zhili, Schaffer, Michael E., Haney, Steven A., Subramanian, Romesh R., Seymour, Albert B., Hughes, Jason D.
Publicado 2011

LPS-TLR4 Signaling to IRF-3/7 and NF-κB Involves the Toll Adapters TRAM and TRIF

por Fitzgerald, Katherine A., Rowe, Daniel C., Barnes, Betsy J., Caffrey, Daniel R., Visintin, Alberto, Latz, Eicke, Monks, Brian, Pitha, Paula M., Golenbock, Douglas T.
Publicado 2003

PFRED: A computational platform for siRNA and antisense oligonucleotides design

por Sciabola, Simone, Xi, Hualin, Cruz, Dario, Cao, Qing, Lawrence, Christine, Zhang, Tianhong, Rotstein, Sergio, Hughes, Jason D., Caffrey, Daniel R., Stanton, Robert V.
Publicado 2021

Lymphocyte crosstalk is required for monocyte-intrinsic trained immunity to Plasmodium falciparum

por Crabtree, Juliet N., Caffrey, Daniel R., de Souza Silva, Leandro, Kurt-Jones, Evelyn A., Dobbs, Katherine, Dent, Arlene, Fitzgerald, Katherine A., Golenbock, Douglas T.
Publicado 2022

PFAAT version 2.0: A tool for editing, annotating, and analyzing multiple sequence alignments

por Caffrey, Daniel R, Dana, Paul H, Mathur, Vidhya, Ocano, Marco, Hong, Eun-Jong, Wang, Yaoyu E, Somaroo, Shyamal, Caffrey, Brian E, Potluri, Shobha, Huang, Enoch S
Publicado 2007

Cellular nucleic acid-binding protein restricts SARS-CoV-2 by regulating interferon and disrupting RNA–protein condensates

por Chen, Yongzhi, Lei, Xuqiu, Jiang, Zhaozhao, Humphries, Fiachra, Parsi, Krishna Mohan, Mustone, Nicholas J., Ramos, Irene, Mutetwa, Tinaye, Fernandez-Sesma, Ana, Maehr, René, Caffrey, Daniel R., Fitzgerald, Katherine A.
Publicado 2023

Influenza Virus Drug Resistance: A Time-Sampled Population Genetics Perspective

por Foll, Matthieu, Poh, Yu-Ping, Renzette, Nicholas, Ferrer-Admetlla, Anna, Bank, Claudia, Shim, Hyunjin, Malaspinas, Anna-Sapfo, Ewing, Gregory, Liu, Ping, Wegmann, Daniel, Caffrey, Daniel R., Zeldovich, Konstantin B., Bolon, Daniel N., Wang, Jennifer P., Kowalik, Timothy F., Schiffer, Celia A., Finberg, Robert W., Jensen, Jeffrey D.
Publicado 2014

Genomic insights into the Ixodes scapularis tick vector of Lyme disease

por Gulia-Nuss, Monika, Nuss, Andrew B., Meyer, Jason M., Sonenshine, Daniel E., Roe, R. Michael, Waterhouse, Robert M., Sattelle, David B., de la Fuente, José, Ribeiro, Jose M., Megy, Karine, Thimmapuram, Jyothi, Miller, Jason R., Walenz, Brian P., Koren, Sergey, Hostetler, Jessica B., Thiagarajan, Mathangi, Joardar, Vinita S., Hannick, Linda I., Bidwell, Shelby, Hammond, Martin P., Young, Sarah, Zeng, Qiandong, Abrudan, Jenica L., Almeida, Francisca C., Ayllón, Nieves, Bhide, Ketaki, Bissinger, Brooke W., Bonzon-Kulichenko, Elena, Buckingham, Steven D., Caffrey, Daniel R., Caimano, Melissa J., Croset, Vincent, Driscoll, Timothy, Gilbert, Don, Gillespie, Joseph J., Giraldo-Calderón, Gloria I., Grabowski, Jeffrey M., Jiang, David, Khalil, Sayed M. S., Kim, Donghun, Kocan, Katherine M., Koči, Juraj, Kuhn, Richard J., Kurtti, Timothy J., Lees, Kristin, Lang, Emma G., Kennedy, Ryan C., Kwon, Hyeogsun, Perera, Rushika, Qi, Yumin, Radolf, Justin D., Sakamoto, Joyce M., Sánchez-Gracia, Alejandro, Severo, Maiara S., Silverman, Neal, Šimo, Ladislav, Tojo, Marta, Tornador, Cristian, Van Zee, Janice P., Vázquez, Jesús, Vieira, Filipe G., Villar, Margarita, Wespiser, Adam R., Yang, Yunlong, Zhu, Jiwei, Arensburger, Peter, Pietrantonio, Patricia V., Barker, Stephen C., Shao, Renfu, Zdobnov, Evgeny M., Hauser, Frank, Grimmelikhuijzen, Cornelis J. P., Park, Yoonseong, Rozas, Julio, Benton, Richard, Pedra, Joao H. F., Nelson, David R., Unger, Maria F., Tubio, Jose M. C., Tu, Zhijian, Robertson, Hugh M., Shumway, Martin, Sutton, Granger, Wortman, Jennifer R., Lawson, Daniel, Wikel, Stephen K., Nene, Vishvanath M., Fraser, Claire M., Collins, Frank H., Birren, Bruce, Nelson, Karen E., Caler, Elisabet, Hill, Catherine A.
Publicado 2016