Inferring spatial and signaling relationships between cells from single cell transcriptomic data

por Cang, Zixuan, Nie, Qing
Publicado 2020

TopologyNet: Topology based deep convolutional and multi-task neural networks for biomolecular property predictions

por Cang, Zixuan, Wei, Guo-Wei
Publicado 2017

DEEPsc: A Deep Learning-Based Map Connecting Single-Cell Transcriptomics and Spatial Imaging Data

por Maseda, Floyd, Cang, Zixuan, Nie, Qing
Publicado 2021

Representability of algebraic topology for biomolecules in machine learning based scoring and virtual screening

por Cang, Zixuan, Mu, Lin, Wei, Guo-Wei
Publicado 2018

A topology-based network tree for the prediction of protein–protein binding affinity changes following mutation

por Wang, Menglun, Cang, Zixuan, Wei, Guo-Wei
Publicado 2020

Identifying multicellular spatiotemporal organization of cells with SpaceFlow

por Ren, Honglei, Walker, Benjamin L., Cang, Zixuan, Nie, Qing
Publicado 2022

Deciphering tissue structure and function using spatial transcriptomics

por Walker, Benjamin L., Cang, Zixuan, Ren, Honglei, Bourgain-Chang, Eric, Nie, Qing
Publicado 2022

A multiscale model via single-cell transcriptomics reveals robust patterning mechanisms during early mammalian embryo development

por Cang, Zixuan, Wang, Yangyang, Wang, Qixuan, Cho, Ken W. Y., Holmes, William, Nie, Qing
Publicado 2021

Screening cell–cell communication in spatial transcriptomics via collective optimal transport

por Cang, Zixuan, Zhao, Yanxiang, Almet, Axel A., Stabell, Adam, Ramos, Raul, Plikus, Maksim V., Atwood, Scott X., Nie, Qing
Publicado 2023

Single-cell transcriptomic analysis of zebrafish cranial neural crest reveals spatiotemporal regulation of lineage decisions during development

por Tatarakis, David, Cang, Zixuan, Wu, Xiaojun, Sharma, Praveer P., Karikomi, Matthew, MacLean, Adam L., Nie, Qing, Schilling, Thomas F.
Publicado 2021

Defining Epidermal Basal Cell States during Skin Homeostasis and Wound Healing Using Single-Cell Transcriptomics

por Haensel, Daniel, Jin, Suoqin, Sun, Peng, Cinco, Rachel, Dragan, Morgan, Nguyen, Quy, Cang, Zixuan, Gong, Yanwen, Vu, Remy, MacLean, Adam L., Kessenbrock, Kai, Gratton, Enrico, Nie, Qing, Dai, Xing
Publicado 2020

A Study of Gene Expression, Structure, and Contractility of iPSC-Derived Cardiac Myocytes from a Family with Heart Disease due to LMNA Mutation

por Mehrabi, Mehrsa, Morris, Tessa A., Cang, Zixuan, Nguyen, Cecilia H. H., Sha, Yutong, Asad, Mira N., Khachikyan, Nyree, Greene, Taylor L., Becker, Danielle M., Nie, Qing, Zaragoza, Michael V., Grosberg, Anna
Publicado 2021