Complex Carbohydrate Utilization by the Healthy Human Microbiome

por Cantarel, Brandi L., Lombard, Vincent, Henrissat, Bernard
Publicado 2012

The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics

por Cantarel, Brandi L., Coutinho, Pedro M., Rancurel, Corinne, Bernard, Thomas, Lombard, Vincent, Henrissat, Bernard
Publicado 2009

BAYSIC: a Bayesian method for combining sets of genome variants with improved specificity and sensitivity

por Cantarel, Brandi L, Weaver, Daniel, McNeill, Nathan, Zhang, Jianhua, Mackey, Aaron J, Reese, Justin
Publicado 2014

Multi-tiered analyses of honey bees that resist or succumb to parasitic mites and viruses

por Weaver, Daniel B., Cantarel, Brandi L., Elsik, Christine G., Boncristiani, Dawn L., Evans, Jay D.
Publicado 2021

SCHOOL: Software for Clinical Health in Oncology for Omics Laboratories

por Raulerson, Chelsea K., Villa, Erika C., Mathews, Jeremy A., Wakeland, Benjamin, Xu, Yan, Gagan, Jeffrey, Cantarel, Brandi L.
Publicado 2022

Analysis of archived residual newborn screening blood spots after whole genome amplification

por Cantarel, Brandi L., Lei, Yunping, Weaver, Daniel, Zhu, Huiping, Farrell, Andrew, Benstead-Hume, Graeme, Reese, Justin, Finnell, Richard H.
Publicado 2015

Metaproteomics reveals persistent and phylum-redundant metabolic functional stability in adult human gut microbiomes of Crohn’s remission patients despite temporal variations in mi...

por Blakeley-Ruiz, J. Alfredo, Erickson, Alison R., Cantarel, Brandi L., Xiong, Weili, Adams, Rachel, Jansson, Janet K., Fraser, Claire M., Hettich, Robert L.
Publicado 2019

NLRP12 downregulates the Wnt/β-catenin pathway via interaction with STK38 to suppress colorectal cancer

por Khan, Shahanshah, Kwak, Youn-Tae, Peng, Lan, Hu, Shuiqing, Cantarel, Brandi L., Lewis, Cheryl M., Gao, Yunpeng, Mani, Ram S., Kanneganti, Thirumala-Devi, Zaki, Hasan
Publicado 2023

Strategies for Metagenomic-Guided Whole-Community Proteomics of Complex Microbial Environments

por Cantarel, Brandi L., Erickson, Alison R., VerBerkmoes, Nathan C., Erickson, Brian K., Carey, Patricia A., Pan, Chongle, Shah, Manesh, Mongodin, Emmanuel F., Jansson, Janet K., Fraser-Liggett, Claire M., Hettich, Robert L.
Publicado 2011

Integrated Metagenomics/Metaproteomics Reveals Human Host-Microbiota Signatures of Crohn's Disease

por Erickson, Alison R., Cantarel, Brandi L., Lamendella, Regina, Darzi, Youssef, Mongodin, Emmanuel F., Pan, Chongle, Shah, Manesh, Halfvarson, Jonas, Tysk, Curt, Henrissat, Bernard, Raes, Jeroen, Verberkmoes, Nathan C., Fraser, Claire M., Hettich, Robert L., Jansson, Janet K.
Publicado 2012

GEAMP, a Novel Gastroesophageal Junction Carcinoma Cell Line Derived from a Malignant Pleural Effusion

por Zhang, Wei, Williams, Taylor A., Bhagwath, Ankur S., Hiermann, Jared S., Peacock, Craig D., Watkins, D. Neil, Ding, Peiguo, Park, Jason Y., Montgomery, Elizabeth A., Forastiere, Arlene A., Jie, Chunfa, Cantarel, Brandi L., Pham, Thai H., Wang, David H.
Publicado 2019

Metabolic Reconstruction for Metagenomic Data and Its Application to the Human Microbiome

por Abubucker, Sahar, Segata, Nicola, Goll, Johannes, Schubert, Alyxandria M., Izard, Jacques, Cantarel, Brandi L., Rodriguez-Mueller, Beltran, Zucker, Jeremy, Thiagarajan, Mathangi, Henrissat, Bernard, White, Owen, Kelley, Scott T., Methé, Barbara, Schloss, Patrick D., Gevers, Dirk, Mitreva, Makedonka, Huttenhower, Curtis
Publicado 2012

Mitochondrial dysfunction during loss of prohibitin 1 triggers Paneth cell defects and ileitis

por Jackson, Dakota N, Panopoulos, Marina, Neumann, William L, Turner, Kevin, Cantarel, Brandi L, Thompson-Snipes, LuAnn, Dassopoulos, Themistocles, Feagins, Linda A, Souza, Rhonda F, Mills, Jason C, Blumberg, Richard S, Venuprasad, K, Thompson, Winston E, Theiss, Arianne L
Publicado 2020

A core gut microbiome in obese and lean twins

por Turnbaugh, Peter J., Hamady, Micah, Yatsunenko, Tanya, Cantarel, Brandi L., Duncan, Alexis, Ley, Ruth E., Sogin, Mitchell L., Jones, William J., Roe, Bruce A., Affourtit, Jason P., Egholm, Michael, Henrissat, Bernard, Heath, Andrew C., Knight, Rob, Gordon, Jeffrey I.
Publicado 2008

A pathogenic UFSP2 variant in an autosomal recessive form of pediatric neurodevelopmental anomalies and epilepsy

por Ni, Min, Afroze, Bushra, Xing, Chao, Pan, Chunxiao, Shao, Yanqiu, Cai, Ling, Cantarel, Brandi L., Pei, Jimin, Grishin, Nick V., Hewson, Stacy, Knight, Devon, Mahida, Sonal, Michel, Donnice, Tarnopolsky, Mark, Poduri, Annapurna, Rotenberg, Alexander, Sondheimer, Neal, DeBerardinis, Ralph J.
Publicado 2021

Microbial community function and biomarker discovery in the human microbiome

por Segata, Nicola, Abubucker, Sahar, Goll, Johannes, Schubert, Alyxandria M, Izard, Jacques, Cantarel, Brandi L, Rodriguez-Mueller, Beltran, Waldron, Levi, Zucker, Jeremy, Thiagarajan, Mathangi, Henrissat, Bernard, White, Owen, Kelley, Scott T, Methé, Barbara, Schloss, Patrick D, Garrett, Wendy S, Gevers, Dirk, Mitreva, Makedonka, Huttenhower, Curtis
Publicado 2011

Analysis of the Gut Microbiota in the Old Order Amish and Its Relation to the Metabolic Syndrome

por Zupancic, Margaret L., Cantarel, Brandi L., Liu, Zhenqiu, Drabek, Elliott F., Ryan, Kathleen A., Cirimotich, Shana, Jones, Cheron, Knight, Rob, Walters, William A., Knights, Daniel, Mongodin, Emmanuel F., Horenstein, Richard B., Mitchell, Braxton D., Steinle, Nanette, Snitker, Soren, Shuldiner, Alan R., Fraser, Claire M.
Publicado 2012

Inter- and intra-specific pan-genomes of Borrelia burgdorferi sensu lato: genome stability and adaptive radiation

por Mongodin, Emmanuel F, Casjens, Sherwood R, Bruno, John F, Xu, Yun, Drabek, Elliott Franco, Riley, David R, Cantarel, Brandi L, Pagan, Pedro E, Hernandez, Yozen A, Vargas, Levy C, Dunn, John J, Schutzer, Steven E, Fraser, Claire M, Qiu, Wei-Gang, Luft, Benjamin J
Publicado 2013

A renal cell carcinoma tumorgraft platform to advance precision medicine

por Elias, Roy, Tcheuyap, Vanina T., Kaushik, Akash K., Singla, Nirmish, Gao, Ming, Torras, Oscar Reig, Christie, Alana, Mulgaonkar, Aditi, Woolford, Layton, Stevens, Christina, Kettimuthu, Kavitha Priya, Pavia-Jimenez, Andrea, Boroughs, Lindsey K., Joyce, Allison, Dakanali, Marianna, Notgrass, Hollis, Margulis, Vitaly, Cadeddu, Jeffrey A., Pedrosa, Ivan, Williams, Noelle S., Sun, Xiankai, DeBerardinis, Ralph J., Öz, Orhan K., Zhong, Hua, Seshagiri, Somasekar, Modrusan, Zora, Cantarel, Brandi L., Kapur, Payal, Brugarolas, James
Publicado 2021

Improved annotation of the insect vector of citrus greening disease: biocuration by a diverse genomics community

por Saha, Surya, Hosmani, Prashant S, Villalobos-Ayala, Krystal, Miller, Sherry, Shippy, Teresa, Flores, Mirella, Rosendale, Andrew, Cordola, Chris, Bell, Tracey, Mann, Hannah, DeAvila, Gabe, DeAvila, Daniel, Moore, Zachary, Buller, Kyle, Ciolkevich, Kathryn, Nandyal, Samantha, Mahoney, Robert, Van Voorhis, Joshua, Dunlevy, Megan, Farrow, David, Hunter, David, Morgan, Taylar, Shore, Kayla, Guzman, Victoria, Izsak, Allison, Dixon, Danielle E, Cridge, Andrew, Cano, Liliana, Cao, Xiaolong, Jiang, Haobo, Leng, Nan, Johnson, Shannon, Cantarel, Brandi L, Richards, Stephen, English, Adam, Shatters, Robert G, Childers, Chris, Chen, Mei-Ju, Hunter, Wayne, Cilia, Michelle, Mueller, Lukas A, Munoz-Torres, Monica, Nelson, David, Poelchau, Monica F, Benoit, Joshua B, Wiersma-Koch, Helen, D’Elia, Tom, Brown, Susan J
Publicado 2017