Phylogeny and expression profiling of CAD and CAD-like genes in hybrid Populus (P. deltoides × P. nigra): evidence from herbivore damage for subfunctionalization and functional div...

por Barakat, Abdelali, Bagniewska-Zadworna, Agnieszka, Frost, Christopher J, Carlson, John E
Publicado 2010

Transcriptome analysis of contrasting resistance to herbivory by Empoasca fabae in two shrub willow species and their hybrid progeny

por Wang, Wanyan, Carlson, Craig H., Smart, Lawrence B., Carlson, John E.
Publicado 2020

Midgut transcriptome profiling of Anoplophora glabripennis, a lignocellulose degrading cerambycid beetle

por Scully, Erin D, Hoover, Kelli, Carlson, John E, Tien, Ming, Geib, Scott M
Publicado 2013

Conservation and divergence of microRNAs in Populus

por Barakat, Abdelali, Wall, Phillip K, DiLoreto, Scott, dePamphilis, Claude W, Carlson, John E
Publicado 2007

Genome-wide association study identifies a major gene for beech bark disease resistance in American beech (Fagus grandifolia Ehrh.)

por Ćalić, Irina, Koch, Jennifer, Carey, David, Addo-Quaye, Charles, Carlson, John E., Neale, David B.
Publicado 2017

Functional genomics and microbiome profiling of the Asian longhorned beetle (Anoplophora glabripennis) reveal insights into the digestive physiology and nutritional ecology of wood...

por Scully, Erin D, Geib, Scott M, Carlson, John E, Tien, Ming, McKenna, Duane, Hoover, Kelli
Publicado 2014

The cinnamyl alcohol dehydrogenase gene family in Populus: phylogeny, organization, and expression

por Barakat, Abdelali, Bagniewska-Zadworna, Agnieszka, Choi, Alex, Plakkat, Urmila, DiLoreto, Denis S, Yellanki, Priyadarshini, Carlson, John E
Publicado 2009

Substantial genome synteny preservation among woody angiosperm species: comparative genomics of Chinese chestnut (Castanea mollissima) and plant reference genomes

por Staton, Margaret, Zhebentyayeva, Tetyana, Olukolu, Bode, Fang, Guang Chen, Nelson, Dana, Carlson, John E, Abbott, Albert G
Publicado 2015

Genome Sequence of Fusarium Isolate MYA-4552 from the Midgut of Anoplophora glabripennis, an Invasive, Wood-Boring Beetle

por Herr, Joshua R., Scully, Erin D., Geib, Scott M., Hoover, Kelli, Carlson, John E., Geiser, David M.
Publicado 2016

Integrated analysis of miRNAome transcriptome and degradome reveals miRNA-target modules governing floral florescence development and senescence across early- and late-flowering ge...

por Guo, Lili, Li, Yuying, Zhang, Chenjie, Wang, Zhanying, Carlson, John E., Yin, Weinlun, Zhang, Xiuxin, Hou, Xiaogai
Publicado 2022

Genome-wide association study of 23 flowering phenology traits and 4 floral agronomic traits in tree peony (Paeonia section Moutan DC.) reveals five genes known to regulate floweri...

por Li, Yuying, Guo, Lili, Wang, Zhanying, Zhao, Dehui, Guo, Dalong, Carlson, John E., Yin, Weilun, Hou, Xiaogai
Publicado 2022

Phylogenetic Analysis of Fusarium solani Associated with the Asian Longhorned Beetle, Anoplophora glabripennis

por Geib, Scott M., Scully, Erin D., Jimenez-Gasco, Maria del Mar, Carlson, John E., Tien, Ming, Hoover, Kelli
Publicado 2012

Characterization of the Transcriptome of the Xerophyte Ammopiptanthus mongolicus Leaves under Drought Stress by 454 Pyrosequencing

por Pang, Tao, Guo, Lili, Shim, Donghwan, Cannon, Nathaniel, Tang, Sha, Chen, Jinhuan, Xia, Xinli, Yin, Weilun, Carlson, John E.
Publicado 2015

Comparison of the transcriptomes of American chestnut (Castanea dentata) and Chinese chestnut (Castanea mollissima) in response to the chestnut blight infection

por Barakat, Abdelali, DiLoreto, Denis S, Zhang, Yi, Smith, Chris, Baier, Kathleen, Powell, William A, Wheeler, Nicholas, Sederoff, Ron, Carlson, John E
Publicado 2009

Development of genomic microsatellites in Gleditsia triacanthos (Fabaceae) using Illumina sequencing(1)

por Owusu, Sandra A., Staton, Margaret, Jennings, Tara N., Schlarbaum, Scott, Coggeshall, Mark V., Romero-Severson, Jeanne, Carlson, John E., Gailing, Oliver
Publicado 2013

Complete plastid genome sequences of Drimys, Liriodendron, and Piper: implications for the phylogenetic relationships of magnoliids

por Cai, Zhengqiu, Penaflor, Cynthia, Kuehl, Jennifer V, Leebens-Mack, James, Carlson, John E, dePamphilis, Claude W, Boore, Jeffrey L, Jansen, Robert K
Publicado 2006

Overexpression of Constans Homologs CO1 and CO2 Fails to Alter Normal Reproductive Onset and Fall Bud Set in Woody Perennial Poplar

por Hsu, Chuan-Yu, Adams, Joshua P., No, Kyoungok, Liang, Haiying, Meilan, Richard, Pechanova, Olga, Barakat, Abdelali, Carlson, John E., Page, Grier P., Yuceer, Cetin
Publicado 2012

Recharacterization of ancient DNA miscoding lesions: insights in the era of sequencing-by-synthesis

por Gilbert, M. Thomas P., Binladen, Jonas, Miller, Webb, Wiuf, Carsten, Willerslev, Eske, Poinar, Hendrik, Carlson, John E., Leebens-Mack, James H., Schuster, Stephan C.
Publicado 2007

Host-plant induced changes in microbial community structure and midgut gene expression in an invasive polyphage (Anoplophora glabripennis)

por Scully, Erin D., Geib, Scott M., Mason, Charles J., Carlson, John E., Tien, Ming, Chen, Han-Yi, Harding, Scott, Tsai, Chung-Jui, Hoover, Kelli
Publicado 2018

Metagenomic Profiling Reveals Lignocellulose Degrading System in a Microbial Community Associated with a Wood-Feeding Beetle

por Scully, Erin D., Geib, Scott M., Hoover, Kelli, Tien, Ming, Tringe, Susannah G., Barry, Kerrie W., Glavina del Rio, Tijana, Chovatia, Mansi, Herr, Joshua R., Carlson, John E.
Publicado 2013