A first dataset toward a standardized community-driven global mapping of the human immunopeptidome

por Faridi, Pouya, Aebersold, Ruedi, Caron, Etienne
Publicado 2016

The MHC class I peptide repertoire is molded by the transcriptome

por Fortier, Marie-Hélène, Caron, Étienne, Hardy, Marie-Pierre, Voisin, Grégory, Lemieux, Sébastien, Perreault, Claude, Thibault, Pierre
Publicado 2008

Unlocking the potential of microfluidics in mass spectrometry-based immunopeptidomics for tumor antigen discovery

por Stutzmann, Charlotte, Peng, Jiaxi, Wu, Zhaoguan, Savoie, Christopher, Sirois, Isabelle, Thibault, Pierre, Wheeler, Aaron R., Caron, Etienne
Publicado 2023

Integrated Immunopeptidomics and Proteomics Study of SARS-CoV-2–Infected Calu-3 Cells Reveals Dynamic Changes in Allele-specific HLA Abundance and Antigen Presentation

por Chen, Rui, Fulton, Kelly M., Tran, Anh, Duque, Diana, Kovalchik, Kevin, Caron, Etienne, Twine, Susan M., Li, Jianjun
Publicado 2023

ER stress affects processing of MHC class I-associated peptides

por Granados, Diana P, Tanguay, Pierre-Luc, Hardy, Marie-Pierre, Caron, Étienne, de Verteuil, Danielle, Meloche, Sylvain, Perreault, Claude
Publicado 2009

A comprehensive map of the mTOR signaling network

por Caron, Etienne, Ghosh, Samik, Matsuoka, Yukiko, Ashton-Beaucage, Dariel, Therrien, Marc, Lemieux, Sébastien, Perreault, Claude, Roux, Philippe P, Kitano, Hiroaki
Publicado 2010

Combining Anterior Cruciate Ligament Reconstruction With Lateral Extra-Articular Procedures in Skeletally Immature Patients Is Safe and Associated With a Low Failure Rate

por Foissey, Constant, Thaunat, Mathieu, Caron, Etienne, Haidar, Ibrahim, Vieira, Thais Dutra, Gomes, Lucas, Freychet, Benjamin, Sonnery-Cottet, Bertrand, Fayard, Jean-Marie
Publicado 2022

RHybridFinder: An R package to process immunopeptidomic data for putative hybrid peptide discovery

por Saab, Frederic, Hamelin, David J., Ma, Qing, Kovalchik, Kevin A., Sirois, Isabelle, Faridi, Pouya, Li, Chen, Purcell, Anthony W., Kubiniok, Peter, Caron, Etienne
Publicado 2021

The MHC I immunopeptidome conveys to the cell surface an integrative view of cellular regulation

por Caron, Etienne, Vincent, Krystel, Fortier, Marie-Hélène, Laverdure, Jean-Philippe, Bramoullé, Alexandre, Hardy, Marie-Pierre, Voisin, Grégory, Roux, Philippe P, Lemieux, Sébastien, Thibault, Pierre, Perreault, Claude
Publicado 2011

A tissue-based draft map of the murine MHC class I immunopeptidome

por Schuster, Heiko, Shao, Wenguang, Weiss, Tobias, Pedrioli, Patrick G.A., Roth, Patrick, Weller, Michael, Campbell, David S., Deutsch, Eric W., Moritz, Robert L., Planz, Oliver, Rammensee, Hans-Georg, Aebersold, Ruedi, Caron, Etienne
Publicado 2018

Understanding the constitutive presentation of MHC class I immunopeptidomes in primary tissues

por Kubiniok, Peter, Marcu, Ana, Bichmann, Leon, Kuchenbecker, Leon, Schuster, Heiko, Hamelin, David J., Duquette, Jérôme D., Kovalchik, Kevin A., Wessling, Laura, Kohlbacher, Oliver, Rammensee, Hans-Georg, Neidert, Marian C., Sirois, Isabelle, Caron, Etienne
Publicado 2022

Epigenetics and Proteomics Join Transcriptomics in the Quest for Tuberculosis Biomarkers

por Esterhuyse, Maria M., Weiner, January, Caron, Etienne, Loxton, Andre G., Iannaccone, Marco, Wagman, Chandre, Saikali, Philippe, Stanley, Kim, Wolski, Witold E., Mollenkopf, Hans-Joachim, Schick, Matthias, Aebersold, Ruedi, Linhart, Heinz, Walzl, Gerhard, Kaufmann, Stefan H. E.
Publicado 2015

The mutational landscape of SARS-CoV-2 variants diversifies T cell targets in an HLA-supertype-dependent manner

por Hamelin, David J., Fournelle, Dominique, Grenier, Jean-Christophe, Schockaert, Jana, Kovalchik, Kevin A., Kubiniok, Peter, Mostefai, Fatima, Duquette, Jérôme D., Saab, Frederic, Sirois, Isabelle, Smith, Martin A., Pattijn, Sofie, Soudeyns, Hugo, Decaluwe, Hélène, Hussin, Julie, Caron, Etienne
Publicado 2022

Cellular Senescence Is Immunogenic and Promotes Antitumor Immunity

por Marin, Ines, Boix, Olga, Garcia-Garijo, Andrea, Sirois, Isabelle, Caballe, Adrià, Zarzuela, Eduardo, Ruano, Irene, Attolini, Camille Stephan-Otto, Prats, Neus, López-Domínguez, José A, Kovatcheva, Marta, Garralda, Elena, Muñoz, Javier, Caron, Etienne, Abad, María, Gros, Alena, Pietrocola, Federico, Serrano, Manuel
Publicado 2023

Minimal Information About an Immuno‐Peptidomics Experiment (MIAIPE)

por Lill, Jennie R., van Veelen, Peter A., Tenzer, Stefan, Admon, Arie, Caron, Etienne, Elias, Joshua E., Heck, Albert J.R., Marcilla, Miguel, Marino, Fabio, Müller, Markus, Peters, Bjoern, Purcell, Anthony, Sette, Alessandro, Sturm, Theo, Ternette, Nicola, Vizcaíno, Juan Antonio, Bassani‐Sternberg, Michal
Publicado 2018

Precise Temporal Profiling of Signaling Complexes in Primary Cells Using SWATH Mass Spectrometry

por Caron, Etienne, Roncagalli, Romain, Hase, Takeshi, Wolski, Witold E., Choi, Meena, Menoita, Marisa G., Durand, Stephane, García-Blesa, Antonio, Fierro-Monti, Ivo, Sajic, Tatjana, Heusel, Moritz, Weiss, Tobias, Malissen, Marie, Schlapbach, Ralph, Collins, Ben C., Ghosh, Samik, Kitano, Hiroaki, Aebersold, Ruedi, Malissen, Bernard, Gstaiger, Matthias
Publicado 2017

Population Genomics Approaches for Genetic Characterization of SARS-CoV-2 Lineages

por Mostefai, Fatima, Gamache, Isabel, N'Guessan, Arnaud, Pelletier, Justin, Huang, Jessie, Murall, Carmen Lia, Pesaranghader, Ahmad, Gaonac'h-Lovejoy, Vanda, Hamelin, David J., Poujol, Raphaël, Grenier, Jean-Christophe, Smith, Martin, Caron, Etienne, Craig, Morgan, Wolf, Guy, Krishnaswamy, Smita, Shapiro, B. Jesse, Hussin, Julie G.
Publicado 2022

MhcVizPipe: A Quality Control Software for Rapid Assessment of Small- to Large-Scale Immunopeptidome Datasets

por Kovalchik, Kevin A., Ma, Qing, Wessling, Laura, Saab, Frederic, D. Duquette, Jérôme, Kubiniok, Peter, Hamelin, David J., Faridi, Pouya, Li, Chen, Purcell, Anthony W., Jang, Anne, Paramithiotis, Eustache, Tognetti, Marco, Reiter, Lukas, Bruderer, Roland, Lanoix, Joël, Bonneil, Éric, Courcelles, Mathieu, Thibault, Pierre, Caron, Etienne, Sirois, Isabelle
Publicado 2021

A repository of assays to quantify 10,000 human proteins by SWATH-MS

por Rosenberger, George, Koh, Ching Chiek, Guo, Tiannan, Röst, Hannes L., Kouvonen, Petri, Collins, Ben C., Heusel, Moritz, Liu, Yansheng, Caron, Etienne, Vichalkovski, Anton, Faini, Marco, Schubert, Olga T., Faridi, Pouya, Ebhardt, H. Alexander, Matondo, Mariette, Lam, Henry, Bader, Samuel L., Campbell, David S., Deutsch, Eric W., Moritz, Robert L., Tate, Stephen, Aebersold, Ruedi
Publicado 2014

An open-source computational and data resource to analyze digital maps of immunopeptidomes

por Caron, Etienne, Espona, Lucia, Kowalewski, Daniel J, Schuster, Heiko, Ternette, Nicola, Alpízar, Adán, Schittenhelm, Ralf B, Ramarathinam, Sri H, Lindestam Arlehamn, Cecilia S, Chiek Koh, Ching, Gillet, Ludovic C, Rabsteyn, Armin, Navarro, Pedro, Kim, Sangtae, Lam, Henry, Sturm, Theo, Marcilla, Miguel, Sette, Alessandro, Campbell, David S, Deutsch, Eric W, Moritz, Robert L, Purcell, Anthony W, Rammensee, Hans-Georg, Stevanovic, Stefan, Aebersold, Ruedi
Publicado 2015