Bridging Domain and Data

por Carpenter, Anne E.
Publicado 2020

A well-engineered path into cell biology and academia

por Carpenter, Anne E.
Publicado 2020

Why I shrank my lab by half

por Carpenter, Anne E
Publicado 2022

Introduction to the Quantitative Analysis of Two-Dimensional Fluorescence Microscopy Images for Cell-Based Screening

por Ljosa, Vebjorn, Carpenter, Anne E.
Publicado 2009

Screening Cellular Feature Measurements for Image-Based Assay Development

por Logan, David J., Carpenter, Anne E.
Publicado 2010

CellProfiler Tracer: exploring and validating high-throughput, time-lapse microscopy image data

por Bray, Mark-Anthony, Carpenter, Anne E.
Publicado 2015

Increasing the Content of High-Content Screening: An Overview

por Singh, Shantanu, Carpenter, Anne E., Genovesio, Auguste
Publicado 2014

CP-CHARM: segmentation-free image classification made accessible

por Uhlmann, Virginie, Singh, Shantanu, Carpenter, Anne E.
Publicado 2016

CellProfiler Analyst 3.0: accessible data exploration and machine learning for image analysis

por Stirling, David R, Carpenter, Anne E, Cimini, Beth A
Publicado 2021

Evaluating batch correction methods for image-based cell profiling

por Arevalo, John, van Dijk, Robert, Carpenter, Anne E., Singh, Shantanu
Publicado 2023

Capturing single-cell heterogeneity via data fusion improves image-based profiling

por Rohban, Mohammad H., Abbasi, Hamdah S., Singh, Shantanu, Carpenter, Anne E.
Publicado 2019

Image-based profiling for drug discovery: due for a machine-learning upgrade?

por Chandrasekaran, Srinivas Niranj, Ceulemans, Hugo, Boyd, Justin D., Carpenter, Anne E.
Publicado 2020

Predicting drug polypharmacology from cell morphology readouts using variational autoencoder latent space arithmetic

por Chow, Yuen Ler, Singh, Shantanu, Carpenter, Anne E., Way, Gregory P.
Publicado 2022

CellProfiler Analyst: interactive data exploration, analysis and classification of large biological image sets

por Dao, David, Fraser, Adam N., Hung, Jane, Ljosa, Vebjorn, Singh, Shantanu, Carpenter, Anne E.
Publicado 2016

Developing open-source software for bioimage analysis: opportunities and challenges

por Levet, Florian, Carpenter, Anne E., Eliceiri, Kevin W., Kreshuk, Anna, Bankhead, Peter, Haase, Robert
Publicado 2021

2020 BioImage Analysis Survey: Community experiences and needs for the future

por Jamali, Nasim, Dobson, Ellen TA, Eliceiri, Kevin W., Carpenter, Anne E., Cimini, Beth A.
Publicado 2022

DoGNet: A deep architecture for synapse detection in multiplexed fluorescence images

por Kulikov, Victor, Guo, Syuan-Ming, Stone, Matthew, Goodman, Allen, Carpenter, Anne, Bathe, Mark, Lempitsky, Victor
Publicado 2019

Predicting reprogramming-related gene expression from cell morphology in human induced pluripotent stem cells

por Wakui, Takashi, Negishi, Mitsuru, Murakami, Yuta, Tominaga, Shunsuke, Shiraishi, Yasushi, Carpenter, Anne E., Singh, Shantanu, Segawa, Hideo
Publicado 2023

Insights into Drug Cardiotoxicity from Biological and Chemical Data: The First Public Classifiers for FDA DICTrank

por Seal, Srijit, Spjuth, Ola, Hosseini-Gerami, Layla, García-Ortegón, Miguel, Singh, Shantanu, Bender, Andreas, Carpenter, Anne E.
Publicado 2023

An open-source solution for advanced imaging flow cytometry data analysis using machine learning

por Hennig, Holger, Rees, Paul, Blasi, Thomas, Kamentsky, Lee, Hung, Jane, Dao, David, Carpenter, Anne E., Filby, Andrew
Publicado 2017