The distinction of CPR bacteria from other bacteria based on protein family content

por Méheust, Raphaël, Burstein, David, Castelle, Cindy J., Banfield, Jillian F.
Publicado 2019

Conserved and lineage-specific hypothetical proteins may have played a central role in the rise and diversification of major archaeal groups

por Méheust, Raphaël, Castelle, Cindy J., Jaffe, Alexander L., Banfield, Jillian F.
Publicado 2022

Lateral Gene Transfer Shapes the Distribution of RuBisCO among Candidate Phyla Radiation Bacteria and DPANN Archaea

por Jaffe, Alexander L, Castelle, Cindy J, Dupont, Christopher L, Banfield, Jillian F
Publicado 2019

Unusual respiratory capacity and nitrogen metabolism in a Parcubacterium (OD1) of the Candidate Phyla Radiation

por Castelle, Cindy J., Brown, Christopher T., Thomas, Brian C., Williams, Kenneth H., Banfield, Jillian F.
Publicado 2017

The rise of diversity in metabolic platforms across the Candidate Phyla Radiation

por Jaffe, Alexander L., Castelle, Cindy J., Matheus Carnevali, Paula B., Gribaldo, Simonetta, Banfield, Jillian F.
Publicado 2020

Genome resolved analysis of a premature infant gut microbial community reveals a Varibaculum cambriense genome and a shift towards fermentation-based metabolism during the third we...

por Brown, Christopher T, Sharon, Itai, Thomas, Brian C, Castelle, Cindy J, Morowitz, Michael J, Banfield, Jillian F
Publicado 2013

Protein Family Content Uncovers Lineage Relationships and Bacterial Pathway Maintenance Mechanisms in DPANN Archaea

por Castelle, Cindy J., Méheust, Raphaël, Jaffe, Alexander L., Seitz, Kiley, Gong, Xianzhe, Baker, Brett J., Banfield, Jillian F.
Publicado 2021

Analysis of five complete genome sequences for members of the class Peribacteria in the recently recognized Peregrinibacteria bacterial phylum

por Anantharaman, Karthik, Brown, Christopher T., Burstein, David, Castelle, Cindy J., Probst, Alexander J., Thomas, Brian C., Williams, Kenneth H., Banfield, Jillian F.
Publicado 2016

Small Genomes and Sparse Metabolisms of Sediment-Associated Bacteria from Four Candidate Phyla

por Kantor, Rose S., Wrighton, Kelly C., Handley, Kim M., Sharon, Itai, Hug, Laura A., Castelle, Cindy J., Thomas, Brian C., Banfield, Jillian F.
Publicado 2013

Insights into the ecology, evolution, and metabolism of the widespread Woesearchaeotal lineages

por Liu, Xiaobo, Li, Meng, Castelle, Cindy J., Probst, Alexander J., Zhou, Zhichao, Pan, Jie, Liu, Yang, Banfield, Jillian F., Gu, Ji-Dong
Publicado 2018

Spectroscopic Characterization of a Green Copper Site in a Single-Domain Cupredoxin

por Roger, Magali, Biaso, Frédéric, Castelle, Cindy J., Bauzan, Marielle, Chaspoul, Florence, Lojou, Elisabeth, Sciara, Giuliano, Caffarri, Stefano, Giudici-Orticoni, Marie-Thérèse, Ilbert, Marianne
Publicado 2014

Unusual Metabolism and Hypervariation in the Genome of a Gracilibacterium (BD1-5) from an Oil-Degrading Community

por Sieber, Christian M. K., Paul, Blair G., Castelle, Cindy J., Hu, Ping, Tringe, Susannah G., Valentine, David L., Andersen, Gary L., Banfield, Jillian F.
Publicado 2019

Community genomic analyses constrain the distribution of metabolic traits across the Chloroflexi phylum and indicate roles in sediment carbon cycling

por Hug, Laura A, Castelle, Cindy J, Wrighton, Kelly C, Thomas, Brian C, Sharon, Itai, Frischkorn, Kyle R, Williams, Kenneth H, Tringe, Susannah G, Banfield, Jillian F
Publicado 2013

Variable impact of geochemical gradients on the functional potential of bacteria, archaea, and phages from the permanently stratified Lac Pavin

por Jaffe, Alexander L., Bardot, Corinne, Le Jeune, Anne-Hélène, Liu, Jett, Colombet, Jonathan, Perrière, Fanny, Billard, Hermine, Castelle, Cindy J., Lehours, Anne-Catherine, Banfield, Jillian F.
Publicado 2023

Gut bacteria are rarely shared by co-hospitalized premature infants, regardless of necrotizing enterocolitis development

por Raveh-Sadka, Tali, Thomas, Brian C, Singh, Andrea, Firek, Brian, Brooks, Brandon, Castelle, Cindy J, Sharon, Itai, Baker, Robyn, Good, Misty, Morowitz, Michael J, Banfield, Jillian F
Publicado 2015

Retroelement guided protein diversification abounds in vast lineages of bacteria and archaea

por Paul, Blair G., Burstein, David, Castelle, Cindy J., Handa, Sumit, Arambula, Diego, Czornyj, Elizabeth, Thomas, Brian C., Ghosh, Partho, Miller, Jeffery F., Banfield, Jillian F., Valentine, David L.
Publicado 2017

Extraordinary phylogenetic diversity and metabolic versatility in aquifer sediment

por Castelle, Cindy J., Hug, Laura A., Wrighton, Kelly C., Thomas, Brian C., Williams, Kenneth H., Wu, Dongying, Tringe, Susannah G., Singer, Steven W., Eisen, Jonathan A., Banfield, Jillian F.
Publicado 2013

RubisCO of a nucleoside pathway known from Archaea is found in diverse uncultivated phyla in bacteria

por Wrighton, Kelly C, Castelle, Cindy J, Varaljay, Vanessa A, Satagopan, Sriram, Brown, Christopher T, Wilkins, Michael J, Thomas, Brian C, Sharon, Itai, Williams, Kenneth H, Tabita, F Robert, Banfield, Jillian F
Publicado 2016

Accurate, multi-kb reads resolve complex populations and detect rare microorganisms

por Sharon, Itai, Kertesz, Michael, Hug, Laura A., Pushkarev, Dmitry, Blauwkamp, Timothy A., Castelle, Cindy J., Amirebrahimi, Mojgan, Thomas, Brian C., Burstein, David, Tringe, Susannah G., Williams, Kenneth H., Banfield, Jillian F.
Publicado 2015

Lipid analysis of CO(2)-rich subsurface aquifers suggests an autotrophy-based deep biosphere with lysolipids enriched in CPR bacteria

por Probst, Alexander J., Elling, Felix J., Castelle, Cindy J., Zhu, Qingzeng, Elvert, Marcus, Birarda, Giovanni, Holman, Hoi-Ying N., Lane, Katherine R., Ladd, Bethany, Ryan, M. Cathryn, Woyke, Tanja, Hinrichs, Kai-Uwe, Banfield, Jillian F.
Publicado 2020