Beyond the Genome: genomics research ten years after the human genome sequence

por Casto, Amanda M, Amid, Clara
Publicado 2010

Genome-Wide Association Study SNPs in the Human Genome Diversity Project Populations: Does Selection Affect Unlinked SNPs with Shared Trait Associations?

por Casto, Amanda M., Feldman, Marcus W.
Publicado 2011

Genome wide association study SNPs in the human genome diversity project samples: does selection affect unlinked SNPs with shared trait associations?

por Casto, Amanda M, Feldman, Marcus W
Publicado 2010

Characterization of X-Linked SNP genotypic variation in globally distributed human populations

por Casto, Amanda M, Li, Jun Z, Absher, Devin, Myers, Richard, Ramachandran, Sohini, Feldman, Marcus W
Publicado 2010

Herpes Simplex Virus Mistyping due to HSV-1 × HSV-2 Interspecies Recombination in Viral Gene Encoding Glycoprotein B

por Casto, Amanda M., Huang, Meei-Li W., Xie, Hong, Jerome, Keith R., Wald, Anna, Johnston, Christine M., Greninger, Alexander L.
Publicado 2020

The Role of Selection in Shaping Diversity of Natural M. tuberculosis Populations

por Pepperell, Caitlin S., Casto, Amanda M., Kitchen, Andrew, Granka, Julie M., Cornejo, Omar E., Holmes, Eddie C., Birren, Bruce, Galagan, James, Feldman, Marcus W.
Publicado 2013

Correction: The Role of Selection in Shaping Diversity of Natural M. tuberculosis Populations

por Pepperell, Caitlin S., Casto, Amanda M., Kitchen, Andrew, Granka, Julie M., Cornejo, Omar E., Holmes, Edward C., Birren, Bruce, Galagan, James, Feldman, Marcus W.
Publicado 2013

Prospective, Real-time Metagenomic Sequencing During Norovirus Outbreak Reveals Discrete Transmission Clusters

por Casto, Amanda M, Adler, Amanda L, Makhsous, Negar, Crawford, Kristen, Qin, Xuan, Kuypers, Jane M, Huang, Meei-Li, Zerr, Danielle M, Greninger, Alexander L
Publicado 2019

Comparative Performance of SARS-CoV-2 Detection Assays Using Seven Different Primer-Probe Sets and One Assay Kit

por Nalla, Arun K., Casto, Amanda M., Huang, Meei-Li W., Perchetti, Garrett A., Sampoleo, Reigran, Shrestha, Lasata, Wei, Yulun, Zhu, Haiying, Jerome, Keith R., Greninger, Alexander L.
Publicado 2020

High-resolution profiling of human cytomegalovirus cell-free DNA in human plasma highlights its exceptionally fragmented nature

por Peddu, Vikas, Bradley, Benjamin T., Casto, Amanda M., Shree, Raj, Colbert, Brice G., Xie, Hong, Santo, Tracy K., Huang, Meei-Li, Cheng, Edith Y., Konnick, Eric, Salipante, Stephen J., Jerome, Keith R., Lockwood, Christina M., Greninger, Alexander L.
Publicado 2020

Host–pathogen dynamics in longitudinal clinical specimens from patients with COVID-19

por Lin, Michelle J., Rachleff, Victoria M., Xie, Hong, Shrestha, Lasata, Lieberman, Nicole A. P., Peddu, Vikas, Addetia, Amin, Casto, Amanda M., Breit, Nathan, Mathias, Patrick C., Huang, Meei-Li, Jerome, Keith R., Greninger, Alexander L., Roychoudhury, Pavitra
Publicado 2022

2202. Influenza Surveillance of Families in an Observational Household Study 2019-2021

por Babu, Tara M, Casto, Amanda M, Heimonen, Jessica, Wang, Yongzhe Wang, Emanuels, Annie, Chow, Eric J, Hoag, Samara, Hughes, James, Ogokeh, Constance E, Rolfes, Melissa A, Uyeki, Timothy M, Starita, Lea, Englund, Janet A, Chu, Helen Y
Publicado 2022

Dynamics of Neutralizing Antibody Titers in the Months After Severe Acute Respiratory Syndrome Coronavirus 2 Infection

por Crawford, Katharine H D, Dingens, Adam S, Eguia, Rachel, Wolf, Caitlin R, Wilcox, Naomi, Logue, Jennifer K, Shuey, Kiel, Casto, Amanda M, Fiala, Brooke, Wrenn, Samuel, Pettie, Deleah, King, Neil P, Greninger, Alexander L, Chu, Helen Y, Bloom, Jesse D
Publicado 2020

Results from a test‐and‐treat study for influenza among residents of homeless shelters in King County, WA: A stepped‐wedge cluster‐randomized trial

por Rogers, Julia H., Casto, Amanda M., Nwanne, Gift, Link, Amy C., Martinez, Miguel A., Nackviseth, Callista, Wolf, Caitlin R., Hughes, James P., Englund, Janet A., Sugg, Nancy, Uyeki, Timothy M., Han, Peter D., Pfau, Brian, Shendure, Jay, Chu, Helen Y.
Publicado 2023

The clinical and genomic epidemiology of seasonal human coronaviruses in congregate homeless shelter settings: A repeated cross-sectional study

por Chow, Eric J., Casto, Amanda M., Rogers, Julia H., Roychoudhury, Pavitra, Han, Peter D., Xie, Hong, Mills, Margaret G., Nguyen, Tien V., Pfau, Brian, Cox, Sarah N., Wolf, Caitlin R., Hughes, James P., Uyeki, Timothy M., Rolfes, Melissa A., Mosites, Emily, Shim, M. Mia, Duchin, Jeffrey S., Sugg, Nancy, Starita, Lea A., Englund, Janet A., Chu, Helen Y.
Publicado 2022

Human Parainfluenza Virus in Homeless Shelters before and during the COVID-19 Pandemic, Washington, USA

por Chow, Eric J., Casto, Amanda M., Sampoleo, Reigran, Mills, Margaret G., Han, Peter D., Xie, Hong, Pfau, Brian, Nguyen, Tien V., Sereewit, Jaydee, Rogers, Julia H., Cox, Sarah N., Rolfes, Melissa A., Ogokeh, Constance, Mosites, Emily, Uyeki, Timothy M., Greninger, Alexander L., Hughes, James P., Shim, M. Mia, Sugg, Nancy, Duchin, Jeffrey S., Starita, Lea M., Englund, Janet A., Roychoudhury, Pavitra, Chu, Helen Y.
Publicado 2022

Evaluating Specimen Quality and Results from a Community-Wide, Home-Based Respiratory Surveillance Study

por Kim, Ashley E., Brandstetter, Elisabeth, Wilcox, Naomi, Heimonen, Jessica, Graham, Chelsey, Han, Peter D., Starita, Lea M., McCulloch, Denise J., Casto, Amanda M., Nickerson, Deborah A., Van de Loo, Margaret M., Mooney, Jennifer, Ilcisin, Misja, Fay, Kairsten A., Lee, Jover, Sibley, Thomas R., Lyon, Victoria, Geyer, Rachel E., Thompson, Matthew, Lutz, Barry R., Rieder, Mark J., Bedford, Trevor, Boeckh, Michael, Englund, Janet A., Chu, Helen Y.
Publicado 2021

Genomic surveillance of SARS-CoV-2 Omicron variants on a university campus

por Weil, Ana A., Luiten, Kyle G., Casto, Amanda M., Bennett, Julia C., O’Hanlon, Jessica, Han, Peter D., Gamboa, Luis S., McDermot, Evan, Truong, Melissa, Gottlieb, Geoffrey S., Acker, Zack, Wolf, Caitlin R., Magedson, Ariana, Chow, Eric J., Lo, Natalie K., Pothan, Lincoln C., McDonald, Devon, Wright, Tessa C., McCaffrey, Kathryn M., Figgins, Marlin D., Englund, Janet A., Boeckh, Michael, Lockwood, Christina M., Nickerson, Deborah A., Shendure, Jay, Bedford, Trevor, Hughes, James P., Starita, Lea M., Chu, Helen Y.
Publicado 2022

Treponema pallidum genome sequencing from six continents reveals variability in vaccine candidate genes and dominance of Nichols clade strains in Madagascar

por Lieberman, Nicole A. P., Lin, Michelle J., Xie, Hong, Shrestha, Lasata, Nguyen, Tien, Huang, Meei-Li, Haynes, Austin M., Romeis, Emily, Wang, Qian-Qiu, Zhang, Rui-Li, Kou, Cai-Xia, Ciccarese, Giulia, Dal Conte, Ivano, Cusini, Marco, Drago, Francesco, Nakayama, Shu-ichi, Lee, Kenichi, Ohnishi, Makoto, Konda, Kelika A., Vargas, Silver K., Eguiluz, Maria, Caceres, Carlos F., Klausner, Jeffrey D., Mitjà, Oriol, Rompalo, Anne, Mulcahy, Fiona, Hook, Edward W., Lukehart, Sheila A., Casto, Amanda M., Roychoudhury, Pavitra, DiMaio, Frank, Giacani, Lorenzo, Greninger, Alexander L.
Publicado 2021

SARS-CoV-2 Epidemiology on a Public University Campus in Washington State

por Weil, Ana A, Sohlberg, Sarah L, O’Hanlon, Jessica A, Casto, Amanda M, Emanuels, Anne W, Lo, Natalie K, Greismer, Emily P, Magedson, Ariana M, Wilcox, Naomi C, Kim, Ashley E, Back, Lewis, Frazar, Christian D, Pelle, Ben, Sibley, Thomas R, Ilcisin, Misja, Lee, Jover, Ryke, Erica L, Craft, J Chris, Schwabe-Fry, Kristen M, Fay, Kairsten A, Cho, Shari, Han, Peter D, Heidl, Sarah J, Pfau, Brian A, Truong, Melissa, Zhong, Weizhi, Srivatsan, Sanjay R, Harb, Katia F, Gottlieb, Geoffrey S, Hughes, James P, Nickerson, Deborah A, Lockwood, Christina M, Starita, Lea M, Bedford, Trevor, Shendure, Jay A, Chu, Helen Y
Publicado 2021