Brain de novo transcriptome assembly of a toad species showing polymorphic anti-predatory behavior

por Chiocchio, Andrea, Libro, Pietro, Martino, Giuseppe, Bisconti, Roberta, Castrignanò, Tiziana, Canestrelli, Daniele
Publicado 2022

The PMDB Protein Model Database

por Castrignanò, Tiziana, De Meo, Paolo D'Onorio, Cozzetto, Domenico, Talamo, Ivano Giuseppe, Tramontano, Anna
Publicado 2006

MD–Ligand–Receptor: A High-Performance Computing Tool for Characterizing Ligand–Receptor Binding Interactions in Molecular Dynamics Trajectories

por Pieroni, Michele, Madeddu, Francesco, Di Martino, Jessica, Arcieri, Manuel, Parisi, Valerio, Bottoni, Paolo, Castrignanò, Tiziana
Publicado 2023

The MEPS server for identifying protein conformational epitopes

por Castrignanò, Tiziana, De Meo, Paolo D'Onorio, Carrabino, Danilo, Orsini, Massimilano, Floris, Matteo, Tramontano, Anna
Publicado 2007

Lignin Nanoparticles Deliver Novel Thymine Biomimetic Photo-Adducts with Antimelanoma Activity

por Gabellone, Sofia, Piccinino, Davide, Filippi, Silvia, Castrignanò, Tiziana, Zippilli, Claudio, Del Buono, Davide, Saladino, Raffaele
Publicado 2022

De novo transcriptome assembly and annotation of the third stage larvae of the zoonotic parasite Anisakis pegreffii

por Palomba, Marialetizia, Libro, Pietro, Di Martino, Jessica, Rughetti, Aurelia, Santoro, Mario, Mattiucci, Simonetta, Castrignanò, Tiziana
Publicado 2022

De novo transcriptome assembly and annotation for gene discovery in Salamandra salamandra at the larval stage

por Libro, Pietro, Chiocchio, Andrea, De Rysky, Erika, Di Martino, Jessica, Bisconti, Roberta, Castrignanò, Tiziana, Canestrelli, Daniele
Publicado 2023

Massive NGS data analysis reveals hundreds of potential novel gene fusions in human cell lines

por Gioiosa, Silvia, Bolis, Marco, Flati, Tiziano, Massini, Annalisa, Garattini, Enrico, Chillemi, Giovanni, Fratelli, Maddalena, Castrignanò, Tiziana
Publicado 2018

A gene expression atlas for different kinds of stress in the mouse brain

por Flati, Tiziano, Gioiosa, Silvia, Chillemi, Giovanni, Mele, Andrea, Oliverio, Alberto, Mannironi, Cecilia, Rinaldi, Arianna, Castrignanò, Tiziana
Publicado 2020

De novo transcriptome assembly of an Antarctic nematode for the study of thermal adaptation in marine parasites

por Palomba, Marialetizia, Libro, Pietro, Di Martino, Jessica, Roca-Geronès, Xavier, Macali, Armando, Castrignanò, Tiziana, Canestrelli, Daniele, Mattiucci, Simonetta
Publicado 2023

ASPIC: a web resource for alternative splicing prediction and transcript isoforms characterization

por Castrignanò, Tiziana, Rizzi, Raffaella, Talamo, Ivano Giuseppe, De Meo, Paolo D'Onorio, Anselmo, Anna, Bonizzoni, Paola, Pesole, Graziano
Publicado 2006

Radiation Genes: a database devoted to microarrays screenings revealing transcriptome alterations induced by ionizing radiation in mammalian cells

por Chiani, Francesco, Iannone, Camilla, Negri, Rodolfo, Paoletti, Daniele, D’Antonio, Mattia, De Meo, Paolo D’onorio, Castrignanò, Tiziana
Publicado 2009

Molecular Docking and Dynamics Simulation Revealed the Potential Inhibitory Activity of New Drugs against Human Topoisomerase I Receptor

por Madeddu, Francesco, Di Martino, Jessica, Pieroni, Michele, Del Buono, Davide, Bottoni, Paolo, Botta, Lorenzo, Castrignanò, Tiziana, Saladino, Raffaele
Publicado 2022

HPC-REDItools: a novel HPC-aware tool for improved large scale RNA-editing analysis

por Flati, Tiziano, Gioiosa, Silvia, Spallanzani, Nicola, Tagliaferri, Ilario, Diroma, Maria Angela, Pesole, Graziano, Chillemi, Giovanni, Picardi, Ernesto, Castrignanò, Tiziana
Publicado 2020

MitoZoa 2.0: a database resource and search tools for comparative and evolutionary analyses of mitochondrial genomes in Metazoa

por D'Onorio de Meo, Paolo, D'Antonio, Mattia, Griggio, Francesca, Lupi, Renato, Borsani, Massimiliano, Pavesi, Giulio, Castrignanò, Tiziana, Pesole, Graziano, Gissi, Carmela
Publicado 2012

WEP: a high-performance analysis pipeline for whole-exome data

por D'Antonio, Mattia, D'Onorio De Meo, Paolo, Paoletti, Daniele, Elmi, Berardino, Pallocca, Matteo, Sanna, Nico, Picardi, Ernesto, Pesole, Graziano, Castrignanò, Tiziana
Publicado 2013

CoVaCS: a consensus variant calling system

por Chiara, Matteo, Gioiosa, Silvia, Chillemi, Giovanni, D’Antonio, Mattia, Flati, Tiziano, Picardi, Ernesto, Zambelli, Federico, Horner, David Stephen, Pesole, Graziano, Castrignanò, Tiziana
Publicado 2018

RAP: RNA-Seq Analysis Pipeline, a new cloud-based NGS web application

por D'Antonio, Mattia, D'Onorio De Meo, Paolo, Pallocca, Matteo, Picardi, Ernesto, D'Erchia, Anna Maria, Calogero, Raffaele A, Castrignanò, Tiziana, Pesole, Graziano
Publicado 2015

Genetic dissection of Sharka disease tolerance in peach (P. persica L. Batsch)

por Cirilli, Marco, Rossini, Laura, Geuna, Filippo, Palmisano, Francesco, Minafra, Angelantonio, Castrignanò, Tiziana, Gattolin, Stefano, Ciacciulli, Angelo, Babini, Anna Rosa, Liverani, Alessandro, Bassi, Daniele
Publicado 2017

parSMURF, a high-performance computing tool for the genome-wide detection of pathogenic variants

por Petrini, Alessandro, Mesiti, Marco, Schubach, Max, Frasca, Marco, Danis, Daniel, Re, Matteo, Grossi, Giuliano, Cappelletti, Luca, Castrignanò, Tiziana, Robinson, Peter N, Valentini, Giorgio
Publicado 2020