Protein Complexes in Bacteria

por Caufield, J. Harry, Abreu, Marco, Wimble, Christopher, Uetz, Peter
Publicado 2015

Bacterial protein meta-interactomes predict cross-species interactions and protein function

por Caufield, J. Harry, Wimble, Christopher, Shary, Semarjit, Wuchty, Stefan, Uetz, Peter
Publicado 2017

Gene Set Summarization using Large Language Models

por Joachimiak, Marcin P., Caufield, J. Harry, Harris, Nomi L., Kim, Hyeongsik, Mungall, Christopher J.
Publicado 2023

Virus-host protein-protein interactions of mycobacteriophage Giles

por Mehla, Jitender, Dedrick, Rebekah M., Caufield, J. Harry, Wagemans, Jeroen, Sakhawalkar, Neha, Johnson, Allison, Hatfull, Graham F., Uetz, Peter
Publicado 2017

A reference set of curated biomedical data and metadata from clinical case reports

por Caufield, J. Harry, Zhou, Yijiang, Garlid, Anders O., Setty, Shaun P., Liem, David A., Cao, Quan, Lee, Jessica M., Murali, Sanjana, Spendlove, Sarah, Wang, Wei, Zhang, Li, Sun, Yizhou, Bui, Alex, Hermjakob, Henning, Watson, Karol E., Ping, Peipei
Publicado 2018

ZapG (YhcB/DUF1043), a novel cell division protein in gamma-proteobacteria linking the Z-ring to septal peptidoglycan synthesis

por Mehla, Jitender, Liechti, George, Morgenstein, Randy M., Caufield, J. Harry, Hosseinnia, Ali, Gagarinova, Alla, Phanse, Sadhna, Goodacre, Norman, Brockett, Mary, Sakhawalkar, Neha, Babu, Mohan, Xiao, Rong, Montelione, Gaetano T., Vorobiev, Sergey, den Blaauwen, Tanneke, Hunt, John F., Uetz, Peter
Publicado 2021

KG-Hub—building and exchanging biological knowledge graphs

por Caufield, J Harry, Putman, Tim, Schaper, Kevin, Unni, Deepak R, Hegde, Harshad, Callahan, Tiffany J, Cappelletti, Luca, Moxon, Sierra A T, Ravanmehr, Vida, Carbon, Seth, Chan, Lauren E, Cortes, Katherina, Shefchek, Kent A, Elsarboukh, Glass, Balhoff, Jim, Fontana, Tommaso, Matentzoglu, Nicolas, Bruskiewich, Richard M, Thessen, Anne E, Harris, Nomi L, Munoz-Torres, Monica C, Haendel, Melissa A, Robinson, Peter N, Joachimiak, Marcin P, Mungall, Christopher J, Reese, Justin T
Publicado 2023

Generalisable long COVID subtypes: Findings from the NIH N3C and RECOVER programmes

por Reese, Justin T., Blau, Hannah, Casiraghi, Elena, Bergquist, Timothy, Loomba, Johanna J., Callahan, Tiffany J., Laraway, Bryan, Antonescu, Corneliu, Coleman, Ben, Gargano, Michael, Wilkins, Kenneth J., Cappelletti, Luca, Fontana, Tommaso, Ammar, Nariman, Antony, Blessy, Murali, T.M., Caufield, J. Harry, Karlebach, Guy, McMurry, Julie A., Williams, Andrew, Moffitt, Richard, Banerjee, Jineta, Solomonides, Anthony E., Davis, Hannah, Kostka, Kristin, Valentini, Giorgio, Sahner, David, Chute, Christopher G., Madlock-Brown, Charisse, Haendel, Melissa A., Robinson, Peter N.
Publicado 2022

Biolink Model: A universal schema for knowledge graphs in clinical, biomedical, and translational science

por Unni, Deepak R., Moxon, Sierra A. T., Bada, Michael, Brush, Matthew, Bruskiewich, Richard, Caufield, J. Harry, Clemons, Paul A., Dancik, Vlado, Dumontier, Michel, Fecho, Karamarie, Glusman, Gustavo, Hadlock, Jennifer J., Harris, Nomi L., Joshi, Arpita, Putman, Tim, Qin, Guangrong, Ramsey, Stephen A., Shefchek, Kent A., Solbrig, Harold, Soman, Karthik, Thessen, Anne E., Haendel, Melissa A., Bizon, Chris, Mungall, Christopher J., Acevedo, Liliana, Ahalt, Stanley C., Alden, John, Alkanaq, Ahmed, Amin, Nada, Avila, Ricardo, Balhoff, Jim, Baranzini, Sergio E., Baumgartner, Andrew, Baumgartner, William, Belhu, Basazin, Brandes, MacKenzie, Brandon, Namdi, Burtt, Noel, Byrd, William, Callaghan, Jackson, Cano, Marco Alvarado, Carrell, Steven, Celebi, Remzi, Champion, James, Chen, Zhehuan, Chen, Mei‐Jan, Chung, Lawrence, Cohen, Kevin, Conlin, Tom, Corkill, Dan, Costanzo, Maria, Cox, Steven, Crouse, Andrew, Crowder, Camerron, Crumbley, Mary E., Dai, Cheng, Dančík, Vlado, De Miranda Azevedo, Ricardo, Deutsch, Eric, Dougherty, Jennifer, Duby, Marc P., Duvvuri, Venkata, Edwards, Stephen, Emonet, Vincent, Fehrmann, Nathaniel, Flannick, Jason, Foksinska, Aleksandra M., Gardner, Vicki, Gatica, Edgar, Glen, Amy, Goel, Prateek, Gormley, Joseph, Greyber, Alon, Haaland, Perry, Hanspers, Kristina, He, Kaiwen, He, Kaiwen, Henrickson, Jeff, Hinderer, Eugene W., Hoatlin, Maureen, Hoffman, Andrew, Huang, Sui, Huang, Conrad, Hubal, Robert, Huellas‐Bruskiewicz, Kenneth, Huls, Forest B., Hunter, Lawrence, Hyde, Greg, Issabekova, Tursynay, Jarrell, Matthew, Jenkins, Lindsay, Johs, Adam, Kang, Jimin, Kanwar, Richa, Kebede, Yaphet, Kim, Keum Joo, Kluge, Alexandria, Knowles, Michael, Koesterer, Ryan, Korn, Daniel, Koslicki, David, Krishnamurthy, Ashok, Kvarfordt, Lindsey, Lee, Jay, Leigh, Margaret, Lin, Jason, Liu, Zheng, Liu, Shaopeng, Ma, Chunyu, Magis, Andrew, Mamidi, Tarun, Mandal, Meisha, Mantilla, Michelle, Massung, Jeffrey, Mauldin, Denise, McClelland, Jason, McMurry, Julie, Mease, Philip, Mendoza, Luis, Mersmann, Marian, Mesbah, Abrar, Might, Matthew, Morton, Kenny, Muller, Sandrine, Muluka, Arun Teja, Osborne, John, Owen, Phil, Patton, Michael, Peden, David B., Peene, R. Carter, Persaud, Bria, Pfaff, Emily, Pico, Alexander, Pollard, Elizabeth, Price, Guthrie, Raj, Shruti, Reilly, Jason, Riutta, Anders, Roach, Jared, Roper, Ryan T., Rosenblatt, Greg, Rubin, Irit, Rucka, Sienna, Rudavsky‐Brody, Nathaniel, Sakaguchi, Rayn, Santos, Eugene, Schaper, Kevin, Schmitt, Charles P., Schurman, Shepherd, Scott, Erik, Seitanakis, Sarah, Sharma, Priya, Shmulevich, Ilya, Shrestha, Manil, Shrivastava, Shalki, Sinha, Meghamala, Smith, Brett, Southall, Noel, Southern, Nicholas, Stillwell, Lisa, Strasser, Michael " Michi", Su, Andrew I., Ta, Casey, Thessen, Anne E., Tinglin, Jillian, Tonstad, Lucas, Tran‐Nguyen, Thi, Tropsha, Alexander, Vaidya, Gaurav, Veenhuis, Luke, Viola, Adam, von Grotthuss, Marcin, Wang, Max, Wang, Patrick, Watkins, Paul B., Weber, Rosina, Wei, Qi, Weng, Chunhua, Whitlock, Jordan, Williams, Mark D., Williams, Andrew, Womack, Finn, Wood, Erica, Wu, Chunlei, Xin, Jiwen Kevin, Xu, Hao, Xu, Colleen, Yakaboski, Chase, Yao, Yao, Yi, Hong, Yilmaz, Arif, Zheng, Marissa, Zhou, Xinghua, Zhou, Eric, Zhu, Qian, Zisk, Tom
Publicado 2022