SNPAAMapper: An efficient genome-wide SNP variant analysis pipeline for next-generation sequencing data

por Bai, Yongsheng, Cavalcoli, James
Publicado 2013

Current status and future perspectives for sequencing livestock genomes

por Bai, Yongsheng, Sartor, Maureen, Cavalcoli, James
Publicado 2012

H2A.B facilitates transcription elongation at methylated CpG loci

por Chen, Yibin, Chen, Qiang, McEachin, Richard C., Cavalcoli, James D., Yu, Xiaochun
Publicado 2014

Complete Genome Sequence of Klebsiella pneumoniae Strain ATCC 43816 KPPR1, a Rifampin-Resistant Mutant Commonly Used in Animal, Genetic, and Molecular Biology Studies

por Broberg, Christopher A., Wu, Weisheng, Cavalcoli, James D., Miller, Virginia L., Bachman, Michael A.
Publicado 2014

Alternative splicing of human NT5E in cirrhosis and hepatocellular carcinoma produces a negative regulator of ecto-5′-nucleotidase (CD73)

por Snider, Natasha T., Altshuler, Peter J., Wan, Shanshan, Welling, Theodore H., Cavalcoli, James, Omary, M. Bishr
Publicado 2014

Convergence of genetic influences in comorbidity

por McEachin, Richard C, Sannareddy, Keerthi S, Cavalcoli, James D, Karnovsky, Alla, Vink, Jacqueline M, Sartor, Maureen A
Publicado 2012

A bioinformatics approach reveals novel interactions of the OVOL transcription factors in the regulation of epithelial – mesenchymal cell reprogramming and cancer progression

por Roca, Hernan, Pande, Manjusha, Huo, Jeffrey S, Hernandez, James, Cavalcoli, James D, Pienta, Kenneth J, McEachin, Richard C
Publicado 2014

Genome-Wide Identification of Klebsiella pneumoniae Fitness Genes during Lung Infection

por Bachman, Michael A., Breen, Paul, Deornellas, Valerie, Mu, Qiao, Zhao, Lili, Wu, Weisheng, Cavalcoli, James D., Mobley, Harry L. T.
Publicado 2015

Next-Generation Sequencing Identifies the Danforth's Short Tail Mouse Mutation as a Retrotransposon Insertion Affecting Ptf1a Expression

por Vlangos, Christopher N., Siuniak, Amanda N., Robinson, Dan, Chinnaiyan, Arul M., Lyons, Robert H., Cavalcoli, James D., Keegan, Catherine E.
Publicado 2013

Novel Bioinformatics Method for Identification of Genome-Wide Non-Canonical Spliced Regions Using RNA-Seq Data

por Bai, Yongsheng, Hassler, Justin, Ziyar, Ahdad, Li, Philip, Wright, Zachary, Menon, Rajasree, Omenn, Gilbert S., Cavalcoli, James D., Kaufman, Randal J., Sartor, Maureen A.
Publicado 2014

A genetic network model of cellular responses to lithium treatment and cocaine abuse in bipolar disorder

por McEachin, Richard C, Chen, Haiming, Sartor, Maureen A, Saccone, Scott F, Keller, Benjamin J, Prossin, Alan R, Cavalcoli, James D, McInnis, Melvin G
Publicado 2010

Identification of Cross-Species Shared Transcriptional Networks of Diabetic Nephropathy in Human and Mouse Glomeruli

por Hodgin, Jeffrey B., Nair, Viji, Zhang, Hongyu, Randolph, Ann, Harris, Raymond C., Nelson, Robert G., Weil, E. Jennifer, Cavalcoli, James D., Patel, Jignesh M., Brosius, Frank C., Kretzler, Matthias
Publicado 2013

LINE-1 Mediated Insertion into Poc1a (Protein of Centriole 1 A) Causes Growth Insufficiency and Male Infertility in Mice

por Geister, Krista A., Brinkmeier, Michelle L., Cheung, Leonard Y., Wendt, Jennifer, Oatley, Melissa J., Burgess, Daniel L., Kozloff, Kenneth M., Cavalcoli, James D., Oatley, Jon M., Camper, Sally A.
Publicado 2015

Modeling complex genetic and environmental influences on comorbid bipolar disorder with tobacco use disorder

por McEachin, Richard C, Saccone, Nancy L, Saccone, Scott F, Kleyman-Smith, Yelena D, Kar, Tiara, Kare, Rajesh K, Ade, Alex S, Sartor, Maureen A, Cavalcoli, James D, McInnis, Melvin G
Publicado 2010

Disruption of RAB40AL function leads to Martin–Probst syndrome, a rare X-linked multisystem neurodevelopmental human disorder

por Bedoyan, Jirair Krikor, Schaibley, Valerie M, Peng, Weiping, Bai, Yongsheng, Mondal, Kajari, Shetty, Amol C, Durham, Mark, Micucci, Joseph A, Dhiraaj, Arti, Skidmore, Jennifer M, Kaplan, Julie B, Skinner, Cindy, Schwartz, Charles E, Antonellis, Anthony, Zwick, Michael E, Cavalcoli, James D, Li, Jun Z, Martin, Donna M
Publicado 2012

The IRE1α/XBP1s Pathway Is Essential for the Glucose Response and Protection of β Cells

por Hassler, Justin R., Scheuner, Donalyn L., Wang, Shiyu, Han, Jaeseok, Kodali, Vamsi K., Li, Philip, Nguyen, Julie, George, Jenny S., Davis, Cory, Wu, Shengyang P., Bai, Yongsheng, Sartor, Maureen, Cavalcoli, James, Malhi, Harmeet, Baudouin, Gregory, Zhang, Yaoyang, Yates III, John R., Itkin-Ansari, Pamela, Volkmann, Niels, Kaufman, Randal J.
Publicado 2015