The Effect of Using an Inappropriate Protein Database for Proteomic Data Analysis

por Knudsen, Giselle M., Chalkley, Robert J.
Publicado 2011

Methods for Enrichment and Assignment of N-Acetylglucosamine Modification Sites

por Maynard, Jason C., Chalkley, Robert J.
Publicado 2021

On Credibility, Clarity, and Compliance

por Burlingame, Al, Carr, Steven A., Bradshaw, Ralph A., Chalkley, Robert J.
Publicado 2015

Characterization of Prenylated C-terminal Peptides Using a Thiopropyl-based Capture Technique and LC-MS/MS

por Wilkins, James A., Kaasik, Krista, Chalkley, Robert J., Burlingame, Alma L.
Publicado 2020

Breaking Up the C Complex Spliceosome Shows Stable Association of Proteins with the Lariat Intron Intermediate

por Coltri, Patricia, Effenberger, Kerstin, Chalkley, Robert J., Burlingame, A. L., Jurica, Melissa S.
Publicado 2011

Improved identification of O-linked glycopeptides from ETD data with optimized scoring for different charge states and cleavage specificities

por Darula, Zsuzsa, Chalkley, Robert J., Lynn, Aenoch, Baker, Peter R., Medzihradszky, Katalin F.
Publicado 2010

Double impact of cigarette smoke and mechanical ventilation on the alveolar epithelial type II cell

por Hirsch, Jan, Chalkley, Robert J, Bentley, Trevor, Burlingame, Alma L, Frank, James A
Publicado 2014

Proteomic analysis of platelet-rich and platelet-poor plasma

por Miroshnychenko, Olga, Chalkley, Robert J., Leib, Ryan D., Everts, Peter A., Dragoo, Jason L.
Publicado 2020

Application of Parallel Reaction Monitoring in (15)N Labeled Samples for Quantification

por Reyes, Andres V., Shrestha, Ruben, Baker, Peter R., Chalkley, Robert J., Xu, Shou-Ling
Publicado 2022

Capture, Release, and Identification of Newly Synthesized Proteins for Improved Profiling of Functional Translatomes

por Phillips, Nancy J., Vinaithirthan, Bala M., Oses-Prieto, Juan A., Chalkley, Robert J., Burlingame, Alma L.
Publicado 2023

Human antibodies targeting cell surface antigens overexpressed by the hormone refractory metastatic prostate cancer cells: ICAM-1 is a tumor antigen that mediates prostate cancer c...

por Conrad, Fraser, Zhu, Xiaodong, Zhang, Xin, Chalkley, Robert J., Burlingame, Alma L., Marks, James D., Liu, Bin
Publicado 2009

(15)N Metabolic Labeling Quantification Workflow in Arabidopsis Using Protein Prospector

por Shrestha, Ruben, Reyes, Andres V., Baker, Peter R., Wang, Zhi-Yong, Chalkley, Robert J., Xu, Shou-Ling
Publicado 2022

Peripheral Elevation of a Klotho Fragment Enhances Brain Function and Resilience in Young, Aging, and α-Synuclein Transgenic Mice

por Leon, Julio, Moreno, Arturo J., Garay, Bayardo I., Chalkley, Robert J., Burlingame, Alma L., Wang, Dan, Dubal, Dena B.
Publicado 2017

Prp8 positioning of U5 snRNA is linked to 5′ splice site recognition

por MacRae, Andrew J., Mayerle, Megan, Hrabeta-Robinson, Eva, Chalkley, Robert J., Guthrie, Christine, Burlingame, Alma L., Jurica, Melissa S.
Publicado 2018

PPKs mediate direct signal transfer from phytochrome photoreceptors to transcription factor PIF3

por Ni, Weimin, Xu, Shou-Ling, González-Grandío, Eduardo, Chalkley, Robert J., Huhmer, Andreas F. R., Burlingame, Alma L., Wang, Zhi-Yong, Quail, Peter H.
Publicado 2017

Revealing nascent proteomics in signaling pathways and cell differentiation

por Forester, Craig M., Zhao, Qian, Phillips, Nancy J., Urisman, Anatoly, Chalkley, Robert J., Oses-Prieto, Juan A., Zhang, Li, Ruggero, Davide, Burlingame, Alma L.
Publicado 2018

Modulating environmental signals to reveal mechanisms and vulnerabilities of cancer persisters

por Sun, Xiaoxiao, Bieber, Jake M., Hammerlindl, Heinz, Chalkley, Robert J., Li, Kathy H., Burlingame, Alma L., Jacobson, Matthew P., Wu, Lani F., Altschuler, Steven J.
Publicado 2022

SPINDLY mediates O-fucosylation of hundreds of proteins and sugar-dependent growth in Arabidopsis

por Bi, Yang, Shrestha, Ruben, Zhang, Zhenzhen, Hsu, Chuan-Chih, Reyes, Andres V, Karunadasa, Sumudu, Baker, Peter R, Maynard, Jason C, Liu, Yang, Hakimi, Amirmansoor, Lopez-Ferrer, Daniel, Hassan, Tahmid, Chalkley, Robert J, Xu, Shou-Ling, Wang, Zhi-Yong
Publicado 2023

Glyco-centric lectin magnetic bead array (LeMBA) − proteomics dataset of human serum samples from healthy, Barrett׳s esophagus and esophageal adenocarcinoma individuals

por Shah, Alok K., Lê Cao, Kim-Anh, Choi, Eunju, Chen, David, Gautier, Benoît, Nancarrow, Derek, Whiteman, David C., Baker, Peter R., Clauser, Karl R., Chalkley, Robert J., Saunders, Nicholas A., Barbour, Andrew P., Joshi, Virendra, Hill, Michelle M.
Publicado 2016

The mzIdentML Data Standard Version 1.2, Supporting Advances in Proteome Informatics

por Vizcaíno, Juan Antonio, Mayer, Gerhard, Perkins, Simon, Barsnes, Harald, Vaudel, Marc, Perez-Riverol, Yasset, Ternent, Tobias, Uszkoreit, Julian, Eisenacher, Martin, Fischer, Lutz, Rappsilber, Juri, Netz, Eugen, Walzer, Mathias, Kohlbacher, Oliver, Leitner, Alexander, Chalkley, Robert J., Ghali, Fawaz, Martínez-Bartolomé, Salvador, Deutsch, Eric W., Jones, Andrew R.
Publicado 2017