Mining locus tags in PubMed Central to improve microbial gene annotation

por Stubben, Chris J, Challacombe, Jean F
Publicado 2014

Shared features of cryptic plasmids from environmental and pathogenic Francisella species

por Challacombe, Jean F., Pillai, Segaran, Kuske, Cheryl R.
Publicado 2017

Genetic diversity within the genus Francisella as revealed by comparative analyses of the genomes of two North American isolates from environmental sources

por Siddaramappa, Shivakumara, Challacombe, Jean F, Petersen, Jeannine M, Pillai, Segaran, Kuske, Cheryl R
Publicado 2012

Biological Consequences of Ancient Gene Acquisition and Duplication in the Large Genome of Candidatus Solibacter usitatus Ellin6076

por Challacombe, Jean F., Eichorst, Stephanie A., Hauser, Loren, Land, Miriam, Xie, Gary, Kuske, Cheryl R.
Publicado 2011

Interrogation of the Burkholderia pseudomallei Genome to Address Differential Virulence among Isolates

por Challacombe, Jean F., Stubben, Chris J., Klimko, Christopher P., Welkos, Susan L., Kern, Steven J., Bozue, Joel A., Worsham, Patricia L., Cote, Christopher K., Wolfe, Daniel N.
Publicado 2014

Genomes and secretomes of Ascomycota fungi reveal diverse functions in plant biomass decomposition and pathogenesis

por Challacombe, Jean F., Hesse, Cedar N., Bramer, Lisa M., McCue, Lee Ann, Lipton, Mary, Purvine, Samuel, Nicora, Carrie, Gallegos-Graves, La Verne, Porras-Alfaro, Andrea, Kuske, Cheryl R.
Publicado 2019

Comparative genomic analysis reveals evidence of two novel Vibrio species closely related to V. cholerae

por Haley, Bradd J, Grim, Christopher J, Hasan, Nur A, Choi, Seon-Young, Chun, Jongsik, Brettin, Thomas S, Bruce, David C, Challacombe, Jean F, Detter, J Chris, Han, Cliff S, Huq, Anwar, Colwell, Rita R
Publicado 2010

A genomic perspective on the potential of Actinobacillus succinogenes for industrial succinate production

por McKinlay, James B, Laivenieks, Maris, Schindler, Bryan D, McKinlay, Anastasia A, Siddaramappa, Shivakumara, Challacombe, Jean F, Lowry, Stephen R, Clum, Alicia, Lapidus, Alla L, Burkhart, Kirk B, Harkins, Victoria, Vieille, Claire
Publicado 2010

Horizontal gene transfer in Histophilus somni and its role in the evolution of pathogenic strain 2336, as determined by comparative genomic analyses

por Siddaramappa, Shivakumara, Challacombe, Jean F, Duncan, Alison J, Gillaspy, Allison F, Carson, Matthew, Gipson, Jenny, Orvis, Joshua, Zaitshik, Jeremy, Barnes, Gentry, Bruce, David, Chertkov, Olga, Detter, J Chris, Han, Cliff S, Tapia, Roxanne, Thompson, Linda S, Dyer, David W, Inzana, Thomas J
Publicado 2011

A comparative genomics perspective on the genetic content of the alkaliphilic haloarchaeon Natrialba magadii ATCC 43099(T)

por Siddaramappa, Shivakumara, Challacombe, Jean F, DeCastro, Rosana E, Pfeiffer, Friedhelm, Sastre, Diego E, Giménez, María I, Paggi, Roberto A, Detter, John C, Davenport, Karen W, Goodwin, Lynne A, Kyrpides, Nikos, Tapia, Roxanne, Pitluck, Samuel, Lucas, Susan, Woyke, Tanja, Maupin-Furlow, Julie A
Publicado 2012

Complete genome sequence of Halorhodospira halophila SL1

por Challacombe, Jean F., Majid, Sophia, Deole, Ratnakar, Brettin, Thomas S., Bruce, David, Delano, Susana F., Detter, John C., Gleasner, Cheryl D., Han, Cliff S., Misra, Monica, Reitenga, Krista G., Mikhailova, Natalia, Woyke, Tanja, Pitluck, Sam, Nolan, Matt, Land, Miriam L., Saunders, Elizabeth, Tapia, Roxanne, Lapidus, Alla, Ivanova, Natalia, Hoff, Wouter D.
Publicado 2013

Complete genome sequence of Dehalogenimonas lykanthroporepellens type strain (BL-DC-9(T)) and comparison to “Dehalococcoides” strains

por Siddaramappa, Shivakumara, Challacombe, Jean F., Delano, Susana F., Green, Lance D., Daligault, Hajnalka, Bruce, David, Detter, Chris, Tapia, Roxanne, Han, Shunsheng, Goodwin, Lynne, Han, James, Woyke, Tanja, Pitluck, Sam, Pennacchio, Len, Nolan, Matt, Land, Miriam, Chang, Yun-Juan, Kyrpides, Nikos C., Ovchinnikova, Galina, Hauser, Loren, Lapidus, Alla, Yan, Jun, Bowman, Kimberly S., da Costa, Milton S., Rainey, Fred A., Moe, William M.
Publicado 2012