GREAM: A Web Server to Short-List Potentially Important Genomic Repeat Elements Based on Over-/Under-Representation in Specific Chromosomal Locations, Such as the Gene Neighborhood...

por Chandrashekar, Darshan Shimoga, Dey, Poulami, Acharya, Kshitish K.
Publicado 2015

Comparative transcriptome analyses reveal genes associated with SARS-CoV-2 infection of human lung epithelial cells

por Chandrashekar, Darshan S., Athar, Mohammad, Manne, Upender, Varambally, Sooryanarayana
Publicado 2021

Pan-cancer molecular subtypes revealed by mass-spectrometry-based proteomic characterization of more than 500 human cancers

por Chen, Fengju, Chandrashekar, Darshan S., Varambally, Sooryanarayana, Creighton, Chad J.
Publicado 2019

Global impact of somatic structural variation on the cancer proteome

por Chen, Fengju, Zhang, Yiqun, Chandrashekar, Darshan S., Varambally, Sooryanarayana, Creighton, Chad J.
Publicado 2023

Proteogenomic characterization of 2002 human cancers reveals pan-cancer molecular subtypes and associated pathways

por Zhang, Yiqun, Chen, Fengju, Chandrashekar, Darshan S., Varambally, Sooryanarayana, Creighton, Chad J.
Publicado 2022

Author Correction: Proteogenomic characterization of 2002 human cancers reveals pan-cancer molecular subtypes and associated pathways

por Zhang, Yiqun, Chen, Fengju, Chandrashekar, Darshan S., Varambally, Sooryanarayana, Creighton, Chad J.
Publicado 2022

Global molecular alterations involving recurrence or progression of pediatric brain tumors

por Chen, Fengju, Chandrashekar, Darshan S., Scheurer, Michael E., Varambally, Sooryanarayana, Creighton, Chad J.
Publicado 2021

TIPMaP: a web server to establish transcript isoform profiles from reliable microarray probes

por Chitturi, Neelima, Balagannavar, Govindkumar, Chandrashekar, Darshan S, Abinaya, Sadashivam, Srini, Vasan S, Acharya, Kshitish K
Publicado 2013

MGEx-Udb: A Mammalian Uterus Database for Expression-Based Cataloguing of Genes across Conditions, Including Endometriosis and Cervical Cancer

por Bajpai, Akhilesh K., Davuluri, Sravanthi, Chandrashekar, Darshan S., Ilakya, Selvarajan, Dinakaran, Mahalakshmi, Acharya, Kshitish K.
Publicado 2012

RNA-seq Reveals the Overexpression of IGSF9 in Endometrial Cancer

por Shi, Zonggao, Li, Chunyan, Tarwater, Laura, Li, Jun, Li, Yang, Kaliney, William, Chandrashekar, Darshan S., Stack, M. Sharon
Publicado 2018

Distinct Gene Expression Profiles of Matched Primary and Metastatic Triple-Negative Breast Cancers

por Kaur, Jaspreet, Chandrashekar, Darshan S., Varga, Zsuzsanna, Sobottka, Bettina, Janssen, Emiel, Kowalski, Jeanne, Kiraz, Umay, Varambally, Sooryanarayana, Aneja, Ritu
Publicado 2022

Chondroitin sulfate proteoglycan serglycin influences protein cargo loading and functions of tumor-derived exosomes

por Purushothaman, Anurag, Bandari, Shyam K., Chandrashekar, Darshan S., Jones, Richard J., Lee, Hans C., Weber, Donna M., Orlowski, Robert Z.
Publicado 2017

Inhibition of Hedgehog signaling reprograms the dysfunctional immune microenvironment in breast cancer

por Hanna, Ann, Metge, Brandon J., Bailey, Sarah K., Chen, Dongquan, Chandrashekar, Darshan S., Varambally, Sooryanarayana, Samant, Rajeev S., Shevde, Lalita A.
Publicado 2018

Whole-Exome Sequencing Reveals High Mutational Concordance between Primary and Matched Recurrent Triple-Negative Breast Cancers

por Kaur, Jaspreet, Chandrashekar, Darshan S., Varga, Zsuzsanna, Sobottka, Bettina, Janssen, Emiel, Gandhi, Khanjan, Kowalski, Jeanne, Kiraz, Umay, Varambally, Sooryanarayana, Aneja, Ritu
Publicado 2023

Endometrial Receptivity: A Revisit to Functional Genomics Studies on Human Endometrium and Creation of HGEx-ERdb

por Bhagwat, Sonali R., Chandrashekar, Darshan S., Kakar, Ruchi, Davuluri, Sravanthi, Bajpai, Akhilesh K., Nayak, Sumeet, Bhutada, Sumit, Acharya, Kshitish, Sachdeva, Geetanjali
Publicado 2013

UALCAN: A Portal for Facilitating Tumor Subgroup Gene Expression and Survival Analyses()

por Chandrashekar, Darshan S., Bashel, Bhuwan, Balasubramanya, Sai Akshaya Hodigere, Creighton, Chad J., Ponce-Rodriguez, Israel, Chakravarthi, Balabhadrapatruni V.S.K., Varambally, Sooryanarayana
Publicado 2017

Fermentable fiber-induced hepatocellular carcinoma in mice recapitulates gene signatures found in human liver cancer

por Chandrashekar, Darshan Shimoga, Golonka, Rachel M., Yeoh, Beng San, Gonzalez, David J., Heikenwälder, Mathias, Gerwirtz, Andrew T., Varambally, Sooryanarayana, Vijay-Kumar, Matam
Publicado 2020

A novel tissue-specific meta-analysis approach for gene expression predictions, initiated with a mammalian gene expression testis database

por Acharya, Kshitish K, Chandrashekar, Darshan S, Chitturi, Neelima, Shah, Hardik, Malhotra, Varun, KS, Sreelakshmi, H, Deepti, Bajpai, Akhilesh, Davuluri, Sravanthi, Bora, Pranami, Rao, Leena
Publicado 2010

Alterations in the Ca(2+) toolkit in oesophageal adenocarcinoma

por Cutliffe, Alana L., McKenna, Sharon L., Chandrashekar, Darshan S., Ng, Alvin, Devonshire, Ginny, Fitzgerald, Rebecca C., O’Donovan, Tracey R., Mackrill, John J.
Publicado 2021

Mass-spectrometry-based proteomic correlates of grade and stage reveal pathways and kinases associated with aggressive human cancers

por Monsivais, Diana, Vasquez, Yasmin, Chen, Fengju, Zhang, Yiqun, Chandrashekar, Darshan S., Faver, John C., Masand, Ramya P., Scheurer, Michael E., Varambally, Sooryanarayana, Matzuk, Martin M., Creighton, Chad J.
Publicado 2021