The characteristic direction: a geometrical approach to identify differentially expressed genes

por Clark, Neil R, Hu, Kevin S, Feldmann, Axel S, Kou, Yan, Chen, Edward Y, Duan, Qiaonan, Ma’ayan, Avi
Publicado 2014

NetworkPainter: dynamic intracellular pathway animation in Cytobank

por Karr, Jonathan R, Guturu, Harendra, Chen, Edward Y, Blair, Stuart L, Irish, Jonathan M, Kotecha, Nikesh, Covert, Markus W
Publicado 2015

Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool

por Chen, Edward Y, Tan, Christopher M, Kou, Yan, Duan, Qiaonan, Wang, Zichen, Meirelles, Gabriela Vaz, Clark, Neil R, Ma’ayan, Avi
Publicado 2013

ESCAPE: database for integrating high-content published data collected from human and mouse embryonic stem cells

por Xu, Huilei, Baroukh, Caroline, Dannenfelser, Ruth, Chen, Edward Y., Tan, Christopher M., Kou, Yan, Kim, Yujin E., Lemischka, Ihor R., Ma'ayan, Avi
Publicado 2013

Systems approach identifies HIPK2 as a critical regulator of kidney fibrosis

por Jin, Yuanmeng, Ratnam, Krishna, Chuang, Peter Y., Fan, Ying, Zhong, Yifei, Dai, Yan, Mazloom, Amin, Chen, Edward Y., D'Agati, Vivette, Xiong, Huabao, Ross, Michael, Chen, Nan, Ma'ayan, Avi, He, John Cijiang
Publicado 2012

LINCS Canvas Browser: interactive web app to query, browse and interrogate LINCS L1000 gene expression signatures

por Duan, Qiaonan, Flynn, Corey, Niepel, Mario, Hafner, Marc, Muhlich, Jeremy L., Fernandez, Nicolas F., Rouillard, Andrew D., Tan, Christopher M., Chen, Edward Y., Golub, Todd R., Sorger, Peter K., Subramanian, Aravind, Ma'ayan, Avi
Publicado 2014

An Esrrb and Nanog Cell Fate Regulatory Module Controlled by Feed Forward Loop Interactions

por Sevilla, Ana, Papatsenko, Dimitri, Mazloom, Amin R., Xu, Huilei, Vasileva, Ana, Unwin, Richard D., LeRoy, Gary, Chen, Edward Y., Garrett-Bakelman, Francine E., Lee, Dung-Fang, Trinite, Benjamin, Webb, Ryan L., Wang, Zichen, Su, Jie, Gingold, Julian, Melnick, Ari, Garcia, Benjamin A., Whetton, Anthony D., MacArthur, Ben D., Ma’ayan, Avi, Lemischka, Ihor R.
Publicado 2021