Structures of the DarR transcription regulator reveal unique modes of second messenger and DNA binding

por Schumacher, Maria A., Lent, Nicholas, Chen, Vincent B., Salinas, Raul
Publicado 2023

Improving SARS-CoV-2 structures: Peer review by early coordinate release

por Croll, Tristan I., Williams, Christopher J., Chen, Vincent B., Richardson, David C., Richardson, Jane S.
Publicado 2021

CERES: a cryo-EM re-refinement system for continuous improvement of deposited models

por Liebschner, Dorothee, Afonine, Pavel V., Moriarty, Nigel W., Poon, Billy K., Chen, Vincent B., Adams, Paul D.
Publicado 2021

Model validation: local diagnosis, correction and when to quit

por Richardson, Jane S., Williams, Christopher J., Hintze, Bradley J., Chen, Vincent B., Prisant, Michael G., Videau, Lizbeth L., Richardson, David C.
Publicado 2018

KinImmerse: Macromolecular VR for NMR ensembles

por Block, Jeremy N, Zielinski, David J, Chen, Vincent B, Davis, Ian W, Vinson, E Claire, Brady, Rachael, Richardson, Jane S, Richardson, David C
Publicado 2009

MolProbity: all-atom structure validation for macromolecular crystallography

por Chen, Vincent B., Arendall, W. Bryan, Headd, Jeffrey J., Keedy, Daniel A., Immormino, Robert M., Kapral, Gary J., Murray, Laura W., Richardson, Jane S., Richardson, David C.
Publicado 2010

Use of knowledge-based restraints in phenix.refine to improve macromolecular refinement at low resolution

por Headd, Jeffrey J., Echols, Nathaniel, Afonine, Pavel V., Grosse-Kunstleve, Ralf W., Chen, Vincent B., Moriarty, Nigel W., Richardson, David C., Richardson, Jane S., Adams, Paul D.
Publicado 2012

phenix.model_vs_data: a high-level tool for the calculation of crystallographic model and data statistics

por Afonine, Pavel V., Grosse-Kunstleve, Ralf W., Chen, Vincent B., Headd, Jeffrey J., Moriarty, Nigel W., Richardson, Jane S., Richardson, David C., Urzhumtsev, Alexandre, Zwart, Peter H., Adams, Paul D.
Publicado 2010

MolProbity: all-atom contacts and structure validation for proteins and nucleic acids

por Davis, Ian W., Leaver-Fay, Andrew, Chen, Vincent B., Block, Jeremy N., Kapral, Gary J., Wang, Xueyi, Murray, Laura W., Arendall, W. Bryan, Snoeyink, Jack, Richardson, Jane S., Richardson, David C.
Publicado 2007

Graphical tools for macromolecular crystallography in PHENIX

por Echols, Nathaniel, Grosse-Kunstleve, Ralf W., Afonine, Pavel V., Bunkóczi, Gábor, Chen, Vincent B., Headd, Jeffrey J., McCoy, Airlie J., Moriarty, Nigel W., Read, Randy J., Richardson, David C., Richardson, Jane S., Terwilliger, Thomas C., Adams, Paul D.
Publicado 2012

PHENIX: a comprehensive Python-based system for macromolecular structure solution

por Adams, Paul D., Afonine, Pavel V., Bunkóczi, Gábor, Chen, Vincent B., Davis, Ian W., Echols, Nathaniel, Headd, Jeffrey J., Hung, Li-Wei, Kapral, Gary J., Grosse-Kunstleve, Ralf W., McCoy, Airlie J., Moriarty, Nigel W., Oeffner, Robert, Read, Randy J., Richardson, David C., Richardson, Jane S., Terwilliger, Thomas C., Zwart, Peter H.
Publicado 2010

Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix

por Liebschner, Dorothee, Afonine, Pavel V., Baker, Matthew L., Bunkóczi, Gábor, Chen, Vincent B., Croll, Tristan I., Hintze, Bradley, Hung, Li-Wei, Jain, Swati, McCoy, Airlie J., Moriarty, Nigel W., Oeffner, Robert D., Poon, Billy K., Prisant, Michael G., Read, Randy J., Richardson, Jane S., Richardson, David C., Sammito, Massimo D., Sobolev, Oleg V., Stockwell, Duncan H., Terwilliger, Thomas C., Urzhumtsev, Alexandre G., Videau, Lizbeth L., Williams, Christopher J., Adams, Paul D.
Publicado 2019