Common themes in nutrient acquisition by plant symbiotic microbes, described by the Gene Ontology

por Chibucos, Marcus C, Tyler, Brett M
Publicado 2009

Draft Genome Sequences of Human Pathogenic Fungus Geomyces pannorum Sensu Lato and Bat White Nose Syndrome Pathogen Geomyces (Pseudogymnoascus) destructans

por Chibucos, Marcus C., Crabtree, Jonathan, Nagaraj, Sushma, Chaturvedi, Sudha, Chaturvedi, Vishnu
Publicado 2013

Common processes in pathogenesis by fungal and oomycete plant pathogens, described with Gene Ontology terms

por Meng, Shaowu, Torto-Alalibo, Trudy, Chibucos, Marcus C, Tyler, Brett M, Dean, Ralph A
Publicado 2009

Programmed cell death in host-symbiont associations, viewed through the Gene Ontology

por Chibucos, Marcus C, Collmer, Candace W, Torto-Alalibo, Trudy, Gwinn-Giglio, Michelle, Lindeberg, Magdalen, Li, Donghui, Tyler, Brett M
Publicado 2009

Phenotype annotation with the ontology of microbial phenotypes (OMP)

por Siegele, Deborah A., LaBonte, Sandra A., Wu, Peter I-Fan, Chibucos, Marcus C., Nandendla, Suvarna, Giglio, Michelle G., Hu, James C.
Publicado 2019

Standardized description of scientific evidence using the Evidence Ontology (ECO)

por Chibucos, Marcus C., Mungall, Christopher J., Balakrishnan, Rama, Christie, Karen R., Huntley, Rachael P., White, Owen, Blake, Judith A., Lewis, Suzanna E., Giglio, Michelle
Publicado 2014

An ontology for microbial phenotypes

por Chibucos, Marcus C, Zweifel, Adrienne E, Herrera, Jonathan C, Meza, William, Eslamfam, Shabnam, Uetz, Peter, Siegele, Deborah A, Hu, James C, Giglio, Michelle G
Publicado 2014

Draft Genome Sequence of Mortierella alpina Isolate CDC-B6842

por Etienne, Kizee A., Chibucos, Marcus C., Su, Qi, Orvis, Joshua, Daugherty, Sean, Ott, Sandra, Sengamalay, Naomi A., Fraser, Claire M., Lockhart, Shawn R., Bruno, Vincent M.
Publicado 2014

From data repositories to submission portals: rethinking the role of domain-specific databases in CollecTF

por Kılıç, Sefa, Sagitova, Dinara M., Wolfish, Shoshannah, Bely, Benoit, Courtot, Mélanie, Ciufo, Stacy, Tatusova, Tatiana, O’Donovan, Claire, Chibucos, Marcus C., Martin, Maria J., Erill, Ivan
Publicado 2016

Single molecule sequencing and genome assembly of a clinical specimen of Loa loa, the causative agent of loiasis

por Tallon, Luke J, Liu, Xinyue, Bennuru, Sasisekhar, Chibucos, Marcus C, Godinez, Alvaro, Ott, Sandra, Zhao, Xuechu, Sadzewicz, Lisa, Fraser, Claire M, Nutman, Thomas B, Dunning Hotopp, Julie C
Publicado 2014

The Confidence Information Ontology: a step towards a standard for asserting confidence in annotations

por Bastian, Frederic B., Chibucos, Marcus C., Gaudet, Pascale, Giglio, Michelle, Holliday, Gemma L., Huang, Hong, Lewis, Suzanna E., Niknejad, Anne, Orchard, Sandra, Poux, Sylvain, Skunca, Nives, Robinson-Rechavi, Marc
Publicado 2015

The Aspergillus Genome Database, a curated comparative genomics resource for gene, protein and sequence information for the Aspergillus research community

por Arnaud, Martha B., Chibucos, Marcus C., Costanzo, Maria C., Crabtree, Jonathan, Inglis, Diane O., Lotia, Adil, Orvis, Joshua, Shah, Prachi, Skrzypek, Marek S., Binkley, Gail, Miyasato, Stuart R., Wortman, Jennifer R., Sherlock, Gavin
Publicado 2010

Rapid transcriptome sequencing of an invasive pest, the brown marmorated stink bug Halyomorpha halys

por Ioannidis, Panagiotis, Lu, Yong, Kumar, Nikhil, Creasy, Todd, Daugherty, Sean, Chibucos, Marcus C, Orvis, Joshua, Shetty, Amol, Ott, Sandra, Flowers, Melissa, Sengamalay, Naomi, Tallon, Luke J, Pick, Leslie, Hotopp, Julie C Dunning
Publicado 2014

Simultaneous Transcriptional Profiling of Bacteria and Their Host Cells

por Humphrys, Michael S., Creasy, Todd, Sun, Yezhou, Shetty, Amol C., Chibucos, Marcus C., Drabek, Elliott F., Fraser, Claire M., Farooq, Umar, Sengamalay, Naomi, Ott, Sandy, Shou, Huizhong, Bavoil, Patrik M., Mahurkar, Anup, Myers, Garry S. A.
Publicado 2013

ECO, the Evidence & Conclusion Ontology: community standard for evidence information

por Giglio, Michelle, Tauber, Rebecca, Nadendla, Suvarna, Munro, James, Olley, Dustin, Ball, Shoshannah, Mitraka, Elvira, Schriml, Lynn M, Gaudet, Pascale, Hobbs, Elizabeth T, Erill, Ivan, Siegele, Deborah A, Hu, James C, Mungall, Chris, Chibucos, Marcus C
Publicado 2019

Annotated draft genome sequences of three species of Cryptosporidium: Cryptosporidium meleagridis isolate UKMEL1, C. baileyi isolate TAMU-09Q1 and C. hominis isolates TU502_2012 an...

por Ifeonu, Olukemi O., Chibucos, Marcus C., Orvis, Joshua, Su, Qi, Elwin, Kristin, Guo, Fengguang, Zhang, Haili, Xiao, Lihua, Sun, Mingfei, Chalmers, Rachel M., Fraser, Claire M., Zhu, Guan, Kissinger, Jessica C., Widmer, Giovanni, Silva, Joana C.
Publicado 2016

The Aspergillus Genome Database (AspGD): recent developments in comprehensive multispecies curation, comparative genomics and community resources

por Arnaud, Martha B., Cerqueira, Gustavo C., Inglis, Diane O., Skrzypek, Marek S., Binkley, Jonathan, Chibucos, Marcus C., Crabtree, Jonathan, Howarth, Clinton, Orvis, Joshua, Shah, Prachi, Wymore, Farrell, Binkley, Gail, Miyasato, Stuart R., Simison, Matt, Sherlock, Gavin, Wortman, Jennifer R.
Publicado 2012

Annotation of gene product function from high-throughput studies using the Gene Ontology

por Attrill, Helen, Gaudet, Pascale, Huntley, Rachael P, Lovering, Ruth C, Engel, Stacia R, Poux, Sylvain, Van Auken, Kimberly M, Georghiou, George, Chibucos, Marcus C, Berardini, Tanya Z, Wood, Valerie, Drabkin, Harold, Fey, Petra, Garmiri, Penelope, Harris, Midori A, Sawford, Tony, Reiser, Leonore, Tauber, Rebecca, Toro, Sabrina
Publicado 2019

An integrated genomic and transcriptomic survey of mucormycosis-causing fungi

por Chibucos, Marcus C., Soliman, Sameh, Gebremariam, Teclegiorgis, Lee, Hongkyu, Daugherty, Sean, Orvis, Joshua, Shetty, Amol C., Crabtree, Jonathan, Hazen, Tracy H., Etienne, Kizee A., Kumari, Priti, O'Connor, Timothy D., Rasko, David A., Filler, Scott G., Fraser, Claire M., Lockhart, Shawn R., Skory, Christopher D., Ibrahim, Ashraf S., Bruno, Vincent M.
Publicado 2016

Implementation of a Pan-Genomic Approach to Investigate Holobiont-Infecting Microbe Interaction: A Case Report of a Leukemic Patient with Invasive Mucormycosis

por Shelburne, Samuel A., Ajami, Nadim J., Chibucos, Marcus C., Beird, Hannah C., Tarrand, Jeffrey, Galloway-Peña, Jessica, Albert, Nathan, Chemaly, Roy F., Ghantoji, Shashank S., Marsh, Lisa, Pemmaraju, Naveen, Andreeff, Michael, Shpall, Elizabeth J., Wargo, Jennifer A., Rezvani, Katayoun, Alousi, Amin, Bruno, Vincent M., Futreal, Phillip A., Petrosino, Joseph F., Kontoyiannis, Dimitrios P.
Publicado 2015