Calling Sample Mix-Ups in Cancer Population Studies

por Lynch, Andy G., Chin, Suet-Feung, Dunning, Mark J., Caldas, Carlos, Tavaré, Simon, Curtis, Christina
Publicado 2012

High-resolution array CGH clarifies events occurring on 8p in carcinogenesis

por Cooke, Susanna L, Pole, Jessica CM, Chin, Suet-Feung, Ellis, Ian O, Caldas, Carlos, Edwards, Paul AW
Publicado 2008

Genome-driven integrated classification of breast cancer validated in over 7,500 samples

por Ali, H Raza, Rueda, Oscar M, Chin, Suet-Feung, Curtis, Christina, Dunning, Mark J, Aparicio, Samuel AJR, Caldas, Carlos
Publicado 2014

Intersect-then-combine approach: improving the performance of somatic variant calling in whole exome sequencing data using multiple aligners and callers

por Callari, Maurizio, Sammut, Stephen-John, De Mattos-Arruda, Leticia, Bruna, Alejandra, Rueda, Oscar M., Chin, Suet-Feung, Caldas, Carlos
Publicado 2017

TOX3 Mutations in Breast Cancer

por Jones, James Owain, Chin, Suet-Feung, Wong-Taylor, Li-An, Leaford, Donna, Ponder, Bruce A. J., Caldas, Carlos, Maia, Ana-Teresa
Publicado 2013

Allele-Specific Up-Regulation of FGFR2 Increases Susceptibility to Breast Cancer

por Meyer, Kerstin B, Maia, Ana-Teresa, O'Reilly, Martin, Teschendorff, Andrew E, Chin, Suet-Feung, Caldas, Carlos, Ponder, Bruce A. J
Publicado 2008

A Prognostic Gene Signature for Metastasis-Free Survival of Triple Negative Breast Cancer Patients

por Lee, UnJin, Frankenberger, Casey, Yun, Jieun, Bevilacqua, Elena, Caldas, Carlos, Chin, Suet-Feung, Rueda, Oscar M., Reinitz, John, Rosner, Marsha Rich
Publicado 2013

Transcriptional profiling reveals a subset of human breast tumors that retain wt TP53 but display mutant p53‐associated features

por Benor, Gal, Fuks, Garold, Chin, Suet‐Feung, Rueda, Oscar M., Mukherjee, Saptaparna, Arandkar, Sharathchandra, Aylon, Yael, Caldas, Carlos, Domany, Eytan, Oren, Moshe
Publicado 2020

PMC42, a breast progenitor cancer cell line, has normal-like mRNA and microRNA transcriptomes

por Git, Anna, Spiteri, Inmaculada, Blenkiron, Cherie, Dunning, Mark J, Pole, Jessica CM, Chin, Suet-Feung, Wang, Yanzhong, Smith, James, Livesey, Frederick J, Caldas, Carlos
Publicado 2008

The pitfalls of platform comparison: DNA copy number array technologies assessed

por Curtis, Christina, Lynch, Andy G, Dunning, Mark J, Spiteri, Inmaculada, Marioni, John C, Hadfield, James, Chin, Suet-Feung, Brenton, James D, Tavaré, Simon, Caldas, Carlos
Publicado 2009

Computational approach to discriminate human and mouse sequences in patient-derived tumour xenografts

por Callari, Maurizio, Batra, Ankita Sati, Batra, Rajbir Nath, Sammut, Stephen-John, Greenwood, Wendy, Clifford, Harry, Hercus, Colin, Chin, Suet-Feung, Bruna, Alejandra, Rueda, Oscar M., Caldas, Carlos
Publicado 2018

Associations between genomic stratification of breast cancer and centrally reviewed tumour pathology in the METABRIC cohort

por Mukherjee, A., Russell, R., Chin, Suet-Feung, Liu, B., Rueda, O. M., Ali, H. R., Turashvili, G., Mahler-Araujo, B., Ellis, I. O., Aparicio, S., Caldas, C., Provenzano, E.
Publicado 2018

Human and mouse oligonucleotide-based array CGH

por van den IJssel, Paul, Tijssen, Marianne, Chin, Suet-Feung, Eijk, Paul, Carvalho, Beatriz, Hopmans, Erik, Holstege, Henne, Bangarusamy, Dhinoth Kumar, Jonkers, Jos, Meijer, Gerrit A., Caldas, Carlos, Ylstra, Bauke
Publicado 2005

Prognostic Value of MammaPrint(®) in Invasive Lobular Breast Cancer

por Beumer, Inès J., Persoon, Marion, Witteveen, Anke, Dreezen, Christa, Chin, Suet-Feung, Sammut, Stephen-John, Snel, Mireille, Caldas, Carlos, Linn, Sabine, van ’t Veer, Laura J., Bernards, Rene, Glas, Annuska M.
Publicado 2016

Next Generation-Targeted Amplicon Sequencing (NG-TAS): an optimised protocol and computational pipeline for cost-effective profiling of circulating tumour DNA

por Gao, Meiling, Callari, Maurizio, Beddowes, Emma, Sammut, Stephen-John, Grzelak, Marta, Biggs, Heather, Jones, Linda, Boumertit, Abdelhamid, Linn, Sabine C., Cortes, Javier, Oliveira, Mafalda, Baird, Richard, Chin, Suet-Feung, Caldas, Carlos
Publicado 2019

Breast tumor microenvironment structures are associated with genomic features and clinical outcome

por Danenberg, Esther, Bardwell, Helen, Zanotelli, Vito R. T., Provenzano, Elena, Chin, Suet-Feung, Rueda, Oscar M., Green, Andrew, Rakha, Emad, Aparicio, Samuel, Ellis, Ian O., Bodenmiller, Bernd, Caldas, Carlos, Ali, H. Raza
Publicado 2022

Master regulators of FGFR2 signalling and breast cancer risk

por Fletcher, Michael N. C., Castro, Mauro A. A., Wang, Xin, de Santiago, Ines, O’Reilly, Martin, Chin, Suet-Feung, Rueda, Oscar M., Caldas, Carlos, Ponder, Bruce A. J., Markowetz, Florian, Meyer, Kerstin B.
Publicado 2013

αE‐catenin is a candidate tumor suppressor for the development of E‐cadherin‐expressing lobular‐type breast cancer

por de Groot, Jolien S, Ratze, Max AK, van Amersfoort, Miranda, Eisemann, Tanja, Vlug, Eva J, Niklaas, Mijanou T, Chin, Suet‐Feung, Caldas, Carlos, van Diest, Paul J, Jonkers, Jos, de Rooij, Johan, Derksen, Patrick WB
Publicado 2018

Copynumber: Efficient algorithms for single- and multi-track copy number segmentation

por Nilsen, Gro, Liestøl, Knut, Loo, Peter Van, Moen Vollan, Hans Kristian, Eide, Marianne B, Rueda, Oscar M, Chin, Suet-Feung, Russell, Roslin, Baumbusch, Lars O, Caldas, Carlos, Børresen-Dale, Anne-Lise, Lingjærde, Ole Christian
Publicado 2012

Structural analysis of the genome of breast cancer cell line ZR-75-30 identifies twelve expressed fusion genes

por Schulte, Ina, Batty, Elizabeth M, Pole, Jessica CM, Blood, Katherine A, Mo, Steven, Cooke, Susanna L, Ng, Charlotte, Howe, Kevin L, Chin, Suet-Feung, Brenton, James D, Caldas, Carlos, Howarth, Karen D, Edwards, Paul AW
Publicado 2012