Classification and Selection of Biomarkers in Genomic Data Using LASSO

por Ghosh, Debashis, Chinnaiyan, Arul M.
Publicado 2005

PubMed QUEST: The PubMed Query Search Tool. An informatics tool to aid cancer centers and cancer investigators in searching the PubMed databases

por Hanauer, David A., Chinnaiyan, Arul M.
Publicado 2007

BETting on a new prostate cancer treatment

por Asangani, Irfan A, Chinnaiyan, Arul M
Publicado 2014

Pathway analysis reveals functional convergence of gene expression profiles in breast cancer

por Shen, Ronglai, Chinnaiyan, Arul M, Ghosh, Debashis
Publicado 2008

Prognostic meta-signature of breast cancer developed by two-stage mixture modeling of microarray data

por Shen, Ronglai, Ghosh, Debashis, Chinnaiyan, Arul M
Publicado 2004

Gene Fusion Markup Language: a prototype for exchanging gene fusion data

por Kalyana-Sundaram, Shanker, Shanmugam, Achiraman, Chinnaiyan, Arul M
Publicado 2012

Estrogen receptor mutations and their role in breast cancer progression

por Alluri, Prasanna G, Speers, Corey, Chinnaiyan, Arul M
Publicado 2014

A Latent Variable Approach for Meta-Analysis of Gene Expression Data from Multiple Microarray Experiments

por Choi, Hyungwon, Shen, Ronglai, Chinnaiyan, Arul M, Ghosh, Debashis
Publicado 2007

Exploring Clinical Associations Using ‘-Omics’ Based Enrichment Analyses

por Hanauer, David A., Rhodes, Daniel R., Chinnaiyan, Arul M.
Publicado 2009

Oculus: faster sequence alignment by streaming read compression

por Veeneman, Brendan A, Iyer, Matthew K, Chinnaiyan, Arul M
Publicado 2012

Landscape of gene fusions in epithelial cancers: seq and ye shall find

por Kumar-Sinha, Chandan, Kalyana-Sundaram, Shanker, Chinnaiyan, Arul M.
Publicado 2015

Urothelial Cancer With Occult Bone Marrow Metastases and Isolated Thrombocytopenia

por Alva, Ajjai, Davis, Elizabeth, Chinnaiyan, Arul M., Dhanasekaran, Saravana, Mehra, Rohit
Publicado 2015

On the detection and refinement of transcription factor binding sites using ChIP-Seq data

por Hu, Ming, Yu, Jindan, Taylor, Jeremy M. G., Chinnaiyan, Arul M., Qin, Zhaohui S.
Publicado 2010

RNA-Seq Accurately Identifies Cancer Biomarker Signatures to Distinguish Tissue of Origin()

por Wei, Iris H., Shi, Yang, Jiang, Hui, Kumar-Sinha, Chandan, Chinnaiyan, Arul M.
Publicado 2014

TACO produces robust multi-sample transcriptome assemblies from RNA-seq

por Niknafs, Yashar S., Pandian, Balaji, Iyer, Hariharan K., Chinnaiyan, Arul M., Iyer, Matthew K.
Publicado 2016

miRConnect 2.0: identification of oncogenic, antagonistic miRNA families in three human cancers

por Hua, Youjia, Larsen, Niels, Kalyana-Sundaram, Shanker, Kjems, Jørgen, Chinnaiyan, Arul M, Peter, Marcus E
Publicado 2013

Selection and cloning of poly(rC)-binding protein 2 and Raf kinase inhibitor protein RNA activators of 2′,5′-oligoadenylate synthetase from prostate cancer cells

por Molinaro, Ross J., Jha, Babal Kant, Malathi, Krishnamurthy, Varambally, Sooryanarayana, Chinnaiyan, Arul M., Silverman, Robert H.
Publicado 2006

Identification of Novel PGR-NR4A3 Fusion in Extraskeletal Myxoid Chondrosarcoma and Resultant Patient Benefit From Tamoxifen Therapy

por Wilbur, H. Catherine, Robinson, Dan R., Wu, Yi-Mi, Kumar-Sinha, Chandan, Chinnaiyan, Arul M., Chugh, Rashmi
Publicado 2022

“Topological Significance” Analysis of Gene Expression and Proteomic Profiles from Prostate Cancer Cells Reveals Key Mechanisms of Androgen Response

por Vellaichamy, Adaikkalam, Dezső, Zoltán, JeBailey, Lellean, Chinnaiyan, Arul M., Sreekumar, Arun, Nesvizhskii, Alexey I., Omenn, Gilbert S., Bugrim, Andrej
Publicado 2010

HPeak: an HMM-based algorithm for defining read-enriched regions in ChIP-Seq data

por Qin, Zhaohui S, Yu, Jianjun, Shen, Jincheng, Maher, Christopher A, Hu, Ming, Kalyana-Sundaram, Shanker, Yu, Jindan, Chinnaiyan, Arul M
Publicado 2010