Structure primed embedding on the transcription factor manifold enables transparent model architectures for gene regulatory network and latent activity inference

por Tjärnberg, Andreas, Beheler-Amass, Maggie, Jackson, Christopher A, Christiaen, Lionel A, Gresham, David, Bonneau, Richard
Publicado 2023

Optimal tuning of weighted kNN- and diffusion-based methods for denoising single cell genomics data

por Tjärnberg, Andreas, Mahmood, Omar, Jackson, Christopher A., Saldi, Giuseppe-Antonio, Cho, Kyunghyun, Christiaen, Lionel A., Bonneau, Richard A.
Publicado 2021

Fibroblast growth factor signalling controls nervous system patterning and pigment cell formation in Ciona intestinalis

por Racioppi, Claudia, Kamal, Ashwani K., Razy-Krajka, Florian, Gambardella, Gennaro, Zanetti, Laura, di Bernardo, Diego, Sanges, Remo, Christiaen, Lionel A., Ristoratore, Filomena
Publicado 2014

Evolutionary recruitment of flexible Esrp-dependent splicing programs into diverse embryonic morphogenetic processes

por Burguera, Demian, Marquez, Yamile, Racioppi, Claudia, Permanyer, Jon, Torres-Méndez, Antonio, Esposito, Rosaria, Albuixech-Crespo, Beatriz, Fanlo, Lucía, D’Agostino, Ylenia, Gohr, Andre, Navas-Perez, Enrique, Riesgo, Ana, Cuomo, Claudia, Benvenuto, Giovanna, Christiaen, Lionel A., Martí, Elisa, D’Aniello, Salvatore, Spagnuolo, Antonietta, Ristoratore, Filomena, Arnone, Maria Ina, Garcia-Fernàndez, Jordi, Irimia, Manuel
Publicado 2017