Comment on ‘rigorous benchmarking of T cell receptor repertoire profiling methods for cancer RNA sequencing’

por Davydov, Alexey N, Bolotin, Dmitry A, Poslavsky, Stanislav V, Chudakov, Dmitry M
Publicado 2023

Interconversion of Anthozoa GFP-like fluorescent and non-fluorescent proteins by mutagenesis

por Bulina, Maria E, Chudakov, Dmitry M, Mudrik, Nikolay N, Lukyanov, Konstantin A
Publicado 2002

Optogenetic in vivo cell manipulation in KillerRed-expressing zebrafish transgenics

por Teh, Cathleen, Chudakov, Dmitry M, Poon, Kar-Lai, Mamedov, Ilgar Z, Sek, Jun-Yan, Shidlovsky, Konstantin, Lukyanov, Sergey, Korzh, Vladimir
Publicado 2010

Circular Permutation of Red Fluorescent Proteins

por Shui, Bo, Wang, Qi, Lee, Frank, Byrnes, Laura J., Chudakov, Dmitry M., Lukyanov, Sergey A., Sondermann, Holger, Kotlikoff, Michael I.
Publicado 2011

Deciphering Repertoire of B16 Melanoma Reactive TCRs by Immunization, In Vitro Restimulation and Sequencing of IFNγ-Secreting T Cells

por Izosimova, Anna V., Yuzhakova, Diana V., Skatova, Valeria D., Volchkova, Lilia N., Zagainova, Elena V., Chudakov, Dmitry M., Sharonov, George V.
Publicado 2021

Insertion of the voltage-sensitive domain into circularly permuted red fluorescent protein as a design for genetically encoded voltage sensor

por Kost, Liubov A., Nikitin, Evgeny S., Ivanova, Violetta O., Sung, Uhna, Putintseva, Ekaterina V., Chudakov, Dmitry M., Balaban, Pavel M., Lukyanov, Konstantin A., Bogdanov, Alexey M.
Publicado 2017

tcR: an R package for T cell receptor repertoire advanced data analysis

por Nazarov, Vadim I., Pogorelyy, Mikhail V., Komech, Ekaterina A., Zvyagin, Ivan V., Bolotin, Dmitry A., Shugay, Mikhail, Chudakov, Dmitry M., Lebedev, Yury B., Mamedov, Ilgar Z.
Publicado 2015

HLA binding of self-peptides is biased towards proteins with specific molecular functions

por Karnaukhov, Vadim, Paes, Wayne, Woodhouse, Isaac B., Partridge, Thomas, Nicastri, Annalisa, Brackenridge, Simon, Scherbinin, Dmitrii, Chudakov, Dmitry M., Zvyagin, Ivan V., Ternette, Nicola, Koohy, Hashem, Borrow, Persephone, Shugay, Mikhail
Publicado 2021

HLA variants have different preferences to present proteins with specific molecular functions which are complemented in frequent haplotypes

por Karnaukhov, Vadim, Paes, Wayne, Woodhouse, Isaac B., Partridge, Thomas, Nicastri, Annalisa, Brackenridge, Simon, Shcherbinin, Dmitrii, Chudakov, Dmitry M., Zvyagin, Ivan V., Ternette, Nicola, Koohy, Hashem, Borrow, Persephone, Shugay, Mikhail
Publicado 2022

Tocilizumab, netakimab, and baricitinib in patients with mild-to-moderate COVID-19: An observational study

por Bryushkova, Ekaterina A., Skatova, Valeria D., Mutovina, Zinaida Y., Zagrebneva, Alena I., Fomina, Daria S., Kruglova, Tatyana S., Akopyan, Anna A., Strazhesko, Irina D., Lukyanov, Sergey A., Tkacheva, Olga N., Lysenko, Maryana A., Chudakov, Dmitry M.
Publicado 2022

Exploring the pre-immune landscape of antigen-specific T cells

por Pogorelyy, Mikhail V., Fedorova, Alla D., McLaren, James E., Ladell, Kristin, Bagaev, Dmitri V., Eliseev, Alexey V., Mikelov, Artem I., Koneva, Anna E., Zvyagin, Ivan V., Price, David A., Chudakov, Dmitry M., Shugay, Mikhail
Publicado 2018

Local fitness landscape of the green fluorescent protein

por Sarkisyan, Karen S., Bolotin, Dmitry A., Meer, Margarita V., Usmanova, Dinara R., Mishin, Alexander S., Sharonov, George V., Ivankov, Dmitry N., Bozhanova, Nina G., Baranov, Mikhail S., Soylemez, Onuralp, Bogatyreva, Natalya S., Vlasov, Peter K., Egorov, Evgeny S., Logacheva, Maria D., Kondrashov, Alexey S., Chudakov, Dmitry M., Putintseva, Ekaterina V., Mamedov, Ilgar Z., Tawfik, Dan S., Lukyanov, Konstantin A., Kondrashov, Fyodor A.
Publicado 2016

Targeted depletion of TRBV9(+) T cells as immunotherapy in a patient with ankylosing spondylitis

por Britanova, Olga V., Lupyr, Kseniia R., Staroverov, Dmitry B., Shagina, Irina A., Aleksandrov, Alexey A., Ustyugov, Yakov Y., Somov, Dmitry V., Klimenko, Alesia, Shostak, Nadejda A., Zvyagin, Ivan V., Stepanov, Alexey V., Merzlyak, Ekaterina M., Davydov, Alexey N., Izraelson, Mark, Egorov, Evgeniy S., Bogdanova, Ekaterina A., Vladimirova, Anna K., Iakovlev, Pavel A., Fedorenko, Denis A., Ivanov, Roman A., Skvortsova, Veronika I., Lukyanov, Sergey, Chudakov, Dmitry M.
Publicado 2023