Envelope‐based partial partial least squares with application to cytokine‐based biomarker analysis for COVID‐19

por Park, Yeonhee, Su, Zhihua, Chung, Dongjun
Publicado 2022

graph-GPA: A graphical model for prioritizing GWAS results and investigating pleiotropic architecture

por Chung, Dongjun, Kim, Hang J., Zhao, Hongyu
Publicado 2017

LRT: Integrative analysis of scRNA-seq and scTCR-seq data to investigate clonal differentiation heterogeneity

por Xie, Juan, Jeon, Hyeongseon, Xin, Gang, Ma, Qin, Chung, Dongjun
Publicado 2023

GPA: A Statistical Approach to Prioritizing GWAS Results by Integrating Pleiotropy and Annotation

por Chung, Dongjun, Yang, Can, Li, Cong, Gelernter, Joel, Zhao, Hongyu
Publicado 2014

Implications of pleiotropy: challenges and opportunities for mining Big Data in biomedicine

por Yang, Can, Li, Cong, Wang, Qian, Chung, Dongjun, Zhao, Hongyu
Publicado 2015

Data exploration, quality control and statistical analysis of ChIP-exo/nexus experiments

por Welch, Rene, Chung, Dongjun, Grass, Jeffrey, Landick, Robert, Keleş, Sündüz
Publicado 2017

The Association between SNPs and a Quantitative Trait: Power Calculation

por Delongchamp, Robert, Faramawi, Mohammed F., Feingold, Eleanor, Chung, Dongjun, Abouelenein, Saly
Publicado 2018

PALMER: improving pathway annotation based on the biomedical literature mining with a constrained latent block model

por Nam, Jin Hyun, Couch, Daniel, da Silveira, Willian A., Yu, Zhenning, Chung, Dongjun
Publicado 2020

dPeak: High Resolution Identification of Transcription Factor Binding Sites from PET and SET ChIP-Seq Data

por Chung, Dongjun, Park, Dan, Myers, Kevin, Grass, Jeffrey, Kiley, Patricia, Landick, Robert, Keleş, Sündüz
Publicado 2013

GPA-MDS: A Visualization Approach to Investigate Genetic Architecture among Phenotypes Using GWAS Results

por Wei, Wei, Ramos, Paula S., Hunt, Kelly J., Wolf, Bethany J., Hardiman, Gary, Chung, Dongjun
Publicado 2016

ShinyGPA: An interactive visualization toolkit for investigating pleiotropic architecture using GWAS datasets

por Kortemeier, Emma, Ramos, Paula S., Hunt, Kelly J., Kim, Hang J., Hardiman, Gary, Chung, Dongjun
Publicado 2018

Statistical Power Analysis for Designing Bulk, Single-Cell, and Spatial Transcriptomics Experiments: Review, Tutorial, and Perspectives

por Jeon, Hyeongseon, Xie, Juan, Jeon, Yeseul, Jung, Kyeong Joo, Gupta, Arkobrato, Chang, Won, Chung, Dongjun
Publicado 2023

Relationships between GAT1 and PTSD, Depression, and Substance Use Disorder

por Bountress, Kaitlin E., Wei, Wei, Sheerin, Christina, Chung, Dongjun, Amstadter, Ananda B., Mandel, Howard, Wang, Zhewu
Publicado 2017

miRmapper: A Tool for Interpretation of miRNA–mRNA Interaction Networks

por da Silveira, Willian A., Renaud, Ludivine, Simpson, Jonathan, Glen, William B., Hazard, Edward. S., Chung, Dongjun, Hardiman, Gary
Publicado 2018

Discovering Transcription Factor Binding Sites in Highly Repetitive Regions of Genomes with Multi-Read Analysis of ChIP-Seq Data

por Chung, Dongjun, Kuan, Pei Fen, Li, Bo, Sanalkumar, Rajendran, Liang, Kun, Bresnick, Emery H., Dewey, Colin, Keleş, Sündüz
Publicado 2011

Impact of Anaerobiosis on Expression of the Iron-Responsive Fur and RyhB Regulons

por Beauchene, Nicole A., Myers, Kevin S., Chung, Dongjun, Park, Dan M., Weisnicht, Allison M., Keleş, Sündüz, Kiley, Patricia J.
Publicado 2015

The Plasticizer Bisphenol A Perturbs the Hepatic Epigenome: A Systems Level Analysis of the miRNome

por Renaud, Ludivine, da Silveira, Willian A., Hazard, E. Starr, Simpson, Jonathan, Falcinelli, Silvia, Chung, Dongjun, Carnevali, Oliana, Hardiman, Gary
Publicado 2017

Trefoil factor 2 secreted from damaged hepatocytes activates hepatic stellate cells to induce fibrogenesis

por Zhang, Bichen, Lapenta, Kalina, Wang, Qi, Nam, Jin Hyun, Chung, Dongjun, Robert, Marie E., Nathanson, Michael H., Yang, Xiaoyong
Publicado 2021

Genome-scale Analysis of Escherichia coli FNR Reveals Complex Features of Transcription Factor Binding

por Myers, Kevin S., Yan, Huihuang, Ong, Irene M., Chung, Dongjun, Liang, Kun, Tran, Frances, Keleş, Sündüz, Landick, Robert, Kiley, Patricia J.
Publicado 2013

Investigating the effects of chronic low-dose radiation exposure in the liver of a hypothermic zebrafish model

por Cahill, Thomas, da Silveira, Willian Abraham, Renaud, Ludivine, Wang, Hao, Williamson, Tucker, Chung, Dongjun, Chan, Sherine, Overton, Ian, Hardiman, Gary
Publicado 2023